Vibrio alfacsensis: D1115_13210
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Entry
D1115_13210 CDS
T05841
Symbol
tolC
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
vaf
Vibrio alfacsensis
Pathway
vaf01501
beta-Lactam resistance
vaf01503
Cationic antimicrobial peptide (CAMP) resistance
vaf02020
Two-component system
vaf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
D1115_13210 (tolC)
09132 Signal transduction
02020 Two-component system
D1115_13210 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D1115_13210 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
D1115_13210 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaf02000
]
D1115_13210 (tolC)
02044 Secretion system [BR:
vaf02044
]
D1115_13210 (tolC)
01504 Antimicrobial resistance genes [BR:
vaf01504
]
D1115_13210 (tolC)
Transporters [BR:
vaf02000
]
Other transporters
Pores ion channels [TC:
1
]
D1115_13210 (tolC)
Secretion system [BR:
vaf02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
D1115_13210 (tolC)
RTX toxin transporter
D1115_13210 (tolC)
Multiple protein transporter
D1115_13210 (tolC)
RaxAB-RaxC type I secretion system protein
D1115_13210 (tolC)
Antimicrobial resistance genes [BR:
vaf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
D1115_13210 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
D1115_13210 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
LntA_helical
Motif
Other DBs
NCBI-ProteinID:
AXY01955
LinkDB
All DBs
Position
I:2719605..2720927
Genome browser
AA seq
440 aa
AA seq
DB search
MKKLLPLFISAALGSMSTSVWADSLAEIYDLAKQNDPQLLSVAAQRDAAFEAITSSRSAL
LPQINLTAGYNLTRGDTDPDAGGSISNDKNVLSAGVGFSQELYNRASWITLDTAEKSARQ
ADASYAATQQGLILRVAQAYFEVLRAQDNLVFVRAEKAAVGRQLEQTKQRFEVGLSAITD
VHDAQAQYDGVLADEILAQNSLINSYESLREITGQEHKNLNVLDTARFSASRSNSPADVL
VDEAKTTNLSLLSARISQDIARDNISLASSGHLPTLSLDGGYNYSDQAESSSDNTTDGFN
IGVNLAVPLYTGGNITSQTKQAEFAYVAASEDLEKEYRSVVKDVRAQNNNINASIGALKA
YEQSVVSARSALEATEAGFDVGTRTIVDVLDSTRRLYDANKNLSNARYDYILSVLQLRQA
VGTLSEQDILDVNAGLKPAN
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactgcttccactatttatcagtgcagcgctaggcagtatgagtacgtctgta
tgggcagactctcttgctgaaatttatgacttagcaaaacaaaacgatcctcaactactc
agcgttgctgcacaacgtgatgcagcatttgaagcgatcacttctagccgcagtgcccta
ttaccacaaatcaacttgactgcgggttacaatctgactcgtggtgatactgaccctgat
gcaggcggcagtatctcaaatgataaaaatgttctatctgcaggcgttggcttctcccaa
gaactgtacaaccgtgcatcttggatcacgctagatacggcagaaaaatctgctcgtcag
gcagatgcgtcatacgcggcgactcaacaaggcctgattcttcgtgttgcacaggcttac
ttcgaagttctacgtgcgcaagacaatcttgtttttgtgcgcgcagaaaaagcagcggtt
ggccgtcagctagagcaaaccaaacaacgttttgaagtcggtctatcggcaatcaccgac
gtacacgatgctcaagcacaatacgatggcgtacttgctgatgaaatattggcacagaac
tctctgatcaatagctacgagtctctacgtgaaatcacaggccaagagcacaaaaaccta
aacgtactggatacggcacgtttctctgcaagtcgttcaaacagtcctgcagatgttctt
gttgatgaagcaaaaacaaccaacctaagcctattatcagctcgaatctctcaagatatc
gctcgcgacaatatctccctagcaagctctggtcacctgccaacactgtcacttgatggt
ggttataattattcggatcaagcagaaagtagcagcgacaacaccactgatggctttaac
attggtgtgaacctagcggtaccactatacactggtggtaatattacctcgcaaaccaaa
caagctgagttcgcgtatgttgctgcaagtgaagatctagagaaagaataccgtagcgtc
gttaaagatgttcgcgcgcaaaacaacaacatcaacgcgtccatcggtgcgctaaaagcg
tatgagcagtctgtggtttccgcacgctcggcactagaagcaacggaggcaggttttgat
gttggtactcgtactatcgtcgatgtactagattcaacacgtcgtctatacgatgcaaac
aaaaatctatctaacgctcgttacgactacatcctaagcgtacttcagctacgccaagca
gtaggtacgctaagtgagcaagatatcctagatgtgaatgccggcctaaaaccagcaaac
taa
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