Variovorax sp. PMC12: C4F17_02945
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Entry
C4F17_02945 CDS
T05380
Name
(GenBank) 4-hydroxyphenylacetate 3-hydroxylase
KO
K14534
4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:
4.2.1.120
5.3.3.3
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00650
Butanoate metabolism
vam00720
Other carbon fixation pathways
vam01100
Metabolic pathways
vam01120
Microbial metabolism in diverse environments
vam01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
C4F17_02945
09102 Energy metabolism
00720 Other carbon fixation pathways
C4F17_02945
Enzymes [BR:
vam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.120 4-hydroxybutanoyl-CoA dehydratase
C4F17_02945
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.3 vinylacetyl-CoA Delta-isomerase
C4F17_02945
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Gene cluster
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Motif
Pfam:
HpaB_N
HpaB
Acyl-CoA_dh_M
PcF
Motif
Other DBs
NCBI-ProteinID:
AVQ79991
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All DBs
Position
1:complement(653551..655173)
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AA seq
540 aa
AA seq
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MNAPLPATTLMSGADYRESLRRYRPTVFVDGRRVESVADEPAFQPGINAIALTYDYALRK
EYEPLMTAVQHTSGKRVNRLSHINTSSGDLLNKLEAVRLVCQETGCAQRYLTHDALNAIA
QVSARIDDARGSTEHTARFHEYLHRVQDQDLTLGVAMTDAKGDRSRRPHEQANVDSYLHV
VERNARGIVISGTKAIVTGAPYVHELLVMPCRNMGKEDADFAVCCAVSLDAPGLTIVARP
AGRPGEKLEHGDALFSRKYGQSTGVCMFDKVFVPWERVFYAGEWEHSGQLTYSYATHHRH
SCIGARAGFGDLLIGAGALMCEANGFDPGKESHLREQMVELITITESFFACGVAASVYGK
ADEHCEVFMPDPVFSNIGKLLLATKIYDMHRIAHYVSGGLIVTLPGPDEDHNPETAARLS
DVLRANPAIPYEQRIETARFIEDLTAGYQGGWYSVISLHGGGSPAAMKQEIWRNYPLGSK
VELVERILERGIAADGSPAAAPHDPARAITRNRQPGKCCDTGCTTPGQPVMVDLPASRRA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccccgctccccgccaccacgctcatgtccggcgccgactaccgcgaatcgctg
cgccgctaccgccccaccgtcttcgtggacggccgccgcgtcgaaagcgtggccgatgag
cccgccttccagcccggcatcaatgccatcgccctcacctacgactacgcgctgcgcaag
gaatacgagccgctgatgacggcggtgcagcacaccagcggcaagcgcgtgaaccggctg
tcgcacatcaacaccagctccggcgacctgctcaacaagctggaggcggtgcgccttgtc
tgccaggaaaccggctgcgcccagcgctacctgacgcacgacgcgctcaacgccatcgcc
caggtctcggcccgcatcgacgacgcccgcggcagtaccgagcacaccgcccgcttccac
gagtacctgcaccgcgtgcaggaccaggacctgacgctgggcgtcgccatgaccgacgcc
aagggcgaccgcagccggcggccgcacgagcaggccaacgtcgacagctacctgcacgtg
gtggagcgcaatgcgcgcggcatcgtcatctcgggcaccaaggccatcgtgacgggagcg
ccctatgtgcatgaactgctggtcatgccctgccgcaacatgggcaaggaagacgccgac
ttcgccgtctgctgcgccgtgtcgctggacgcgccggggctcaccatcgtcgcccgcccc
gccgggcgccccggggaaaagctcgagcacggcgacgcccttttcagccgcaagtacggg
cagagcaccggcgtatgcatgttcgacaaggtcttcgtgccctgggagcgcgtgttctac
gccggggaatgggagcattccggccaactgacctacagctacgccacgcaccaccgccac
agctgcatcggcgcgcgcgcgggcttcggcgacctgctgatcggcgccggcgcgctgatg
tgcgaggccaacggcttcgacccgggcaaggaaagccatctgcgcgagcagatggtcgag
ctcatcaccatcaccgaaagcttctttgcctgcggcgtggcggccagcgtctacggcaag
gccgacgagcactgcgaggtcttcatgccagacccggtgttcagcaacatcggcaagctg
ctgctggccaccaagatctacgacatgcaccgcatcgcgcactacgtgagcggcgggctc
atcgtcaccctgcccggccccgacgaagaccacaaccccgagaccgccgcccgcctgtcg
gacgtgctgcgcgccaacccggccattccctacgagcagcgcatcgagaccgcccgcttc
atcgaggatctgacggcgggctaccagggcggctggtacagcgtgatcagcctgcacggc
ggcggttcgccggctgcgatgaagcaggaaatctggcgcaactacccgctcggctccaag
gtcgaactggtggagcgcatcctcgagcgcggcatcgcggcggacggatcgcccgccgcc
gccccgcacgacccggcacgcgccatcacccgcaaccgccagcccggcaaatgctgcgac
accggctgcacaacgccagggcaaccggtgatggtcgacctgccggcgtcccgccgcgcc
taa
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