Variovorax sp. 38R: IG196_08825
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Entry
IG196_08825 CDS
T10235
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
vav Variovorax sp. 38R
Pathway
vav01501
beta-Lactam resistance
vav01503
Cationic antimicrobial peptide (CAMP) resistance
vav02020
Two-component system
vav03070
Bacterial secretion system
Brite
Transporters [BR:
vav02000
]
Other transporters
Pores ion channels [TC:
1
]
IG196_08825
Secretion system [BR:
vav02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
IG196_08825
RTX toxin transporter
IG196_08825
Multiple protein transporter
IG196_08825
RaxAB-RaxC type I secretion system protein
IG196_08825
Antimicrobial resistance genes [BR:
vav01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
IG196_08825
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
IG196_08825
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QOF81841
UniProt:
A0A7L8SPM7
LinkDB
All DBs
Position
complement(1970419..1971795)
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AA seq
458 aa
AA seq
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MACGAVFAAVLAFPVHGQSLVEIYASARGYDATYQGARAQYEANLARAAQAKAGILPSVG
LSAAASHTRQDLSTEGSATTRGFNTQNVGINATQPLYRPANWATYEQGQRQAEVAQAVLT
IAEQDLIVRVSQAYFDVLASQDSLSLVRAQKVAVAEQLASAKRNFEVGTTTITDAREAQA
RYDLVIAQEIAAENDLQVKKIVLDQLVGNTGSVPVPLAAPVVLPPLAPADIEVWTSHADA
AHPAIQQARLGLDVAGLEVQKAQAGHLPTLDATLGYNVTNNPQGTSTTPGRSRIKALTVG
VALNLPLFAGYAIENRVRETLALEDQSRSVLEATRRSVAQATRATYLGLVSAAGQVKALE
AAEVSSQIALEANRMGYQVGVRINIDVLNAQSQLFQTKRDLAVARYSVLLGNLKLRQANG
TLLPEDLNAIDAALATHGRTPVDSAAPVSVSKRTPARP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ctggcatgcggtgccgtgttcgcagcggtcctcgcgttccccgtccatggccagagcctg
gtcgagatctacgcatcggcacgcggctacgacgccacctaccagggcgcgcgggcccag
tacgaggccaacctggcgcgtgccgcgcaggccaaggccggcatcctgccctcggtcggg
ctctcggccgctgcctcgcacacccggcaggacctctcgacggaaggcagtgcgacgacg
cgcgggttcaacacccagaacgtcggcatcaacgccacgcagccgctgtaccgccccgcc
aactgggccacctacgagcagggccagcgccaggccgaagtggcgcaggccgtgctcacc
attgccgagcaagacctcatcgtgcgcgtgagccaggcttacttcgacgtgctcgccagc
caggacagcctgtccctcgtgcgcgcgcagaaggtcgccgtggccgaacagctggcctcg
gccaagcgcaacttcgaggtcggcaccaccaccatcaccgacgcacgcgaggcccaggcc
cgctacgacctggtgattgcgcaggagatcgccgccgagaacgacctgcaggtgaagaag
atcgtgctcgaccagctcgtcggcaacaccggcagcgtgcccgtgccgctggcggcgccc
gtggttctgcccccgctcgcgcccgccgacatcgaggtctggacctcgcacgcggatgcc
gcacaccctgcgatccagcaggcccggctgggcctggacgtggccgggctcgaggtgcag
aaggcgcaggccggtcacctgcccacgctcgatgcgaccctgggctacaacgtcacgaac
aacccccagggcaccagcaccacgccgggccgctcgcggatcaaggccctcaccgtgggc
gtcgcgctcaacctgcccttgtttgccggctacgcaattgagaaccgcgtccgggaaacg
ctggcgctcgaagaccagtcccgctcggtgctcgaggccacgcgccgcagcgtcgcgcag
gccacccgggccacctacctgggactggtgtcagcagccggccaggtgaaagcgctggaa
gccgccgaagtctccagccagatcgcactggaggccaatcgcatgggctaccaggtgggc
gtgcgcatcaacatcgacgtgctcaatgcgcagagccagctcttccagaccaagcgcgac
ctggcggtggcgcgctattcggtgctgctcggcaatctcaagctgcggcaggccaacggc
acgctgctgcccgaggacctgaacgccatcgatgccgcgcttgcgacccacggtcgcacc
ccggtcgacagtgcggcgcccgtctccgtgtccaagagaacgccggctcgcccatga
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