Variovorax sp. 38R: IG196_21570
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Entry
IG196_21570 CDS
T10235
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
vav Variovorax sp. 38R
Pathway
vav01501
beta-Lactam resistance
vav01503
Cationic antimicrobial peptide (CAMP) resistance
vav02020
Two-component system
vav03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
IG196_21570
09132 Signal transduction
02020 Two-component system
IG196_21570
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IG196_21570
01503 Cationic antimicrobial peptide (CAMP) resistance
IG196_21570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_21570
02044 Secretion system [BR:
vav02044
]
IG196_21570
01504 Antimicrobial resistance genes [BR:
vav01504
]
IG196_21570
Transporters [BR:
vav02000
]
Other transporters
Pores ion channels [TC:
1
]
IG196_21570
Secretion system [BR:
vav02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
IG196_21570
RTX toxin transporter
IG196_21570
Multiple protein transporter
IG196_21570
RaxAB-RaxC type I secretion system protein
IG196_21570
Antimicrobial resistance genes [BR:
vav01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
IG196_21570
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
IG196_21570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QOF76936
UniProt:
A0A7L8SAT0
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All DBs
Position
4661726..4663255
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AA seq
509 aa
AA seq
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MPPRPRLLPLSAVLASVIAGLLALPAQGQTLNELYDSARGFDATYQGARAQYEANLARAA
QAKAGILPAVGLTAGVNRSNLDIDTLTGTSRGASASRDFNTQNVGINATQPLYRPANWAT
YEQGKRQTEIALAVLTTAEQDLIVRVSQAYFDVLASQDSLALVRAQKVAVAEQLASAKRN
FEVGTSTITDSREAQARYDLVIAQEIAAENDLQVKKIVLDQLVGRPGSVPVPLAVPVVLP
TAQPADINTWVAQAEEVHPAIQQARLGLDVAGLEVQKAQAGHKPTLDANLGYNVTRNPTG
TSTSTVGTRVNAATVGVTFNLPLFAGFATENRIKETLALEDQSRSVLDGTRRSVAQATRA
AYLGLVSGAGQVKALEAAEASSQSALDANKLGYQVGVRINIDVLNSQSQLFQTKRDLAQA
RYNVLLGNLKLRQANGTLTTDDMNAINATLARNGSTPAVPAATTGAPVVPVTPPAIPVVP
PVPVQPFNPPAPTMPSAPPPPVILNPPVR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaggccccggcttctgccactttccgcagtcctcgcaagcgtcattgcaggc
ctgctcgccctgccggcccagggccagacactgaacgaactctacgattccgcgcgcggc
ttcgacgccacctaccagggcgcacgggcccagtacgaggccaacctggcgcgtgcggcg
caggccaaggccggcatcctgccggccgtcgggctcacggccggcgtgaaccgcagcaac
ctggacatcgacaccctcacgggcaccagccgcggcgccagcgcctcgcgcgacttcaac
acgcagaacgtcggcatcaacgccacgcagccgctgtaccgccccgccaactgggccacc
tacgagcagggcaagcgccagacggagattgcgctggcggtgctcaccaccgccgagcag
gacctgatcgtgcgcgtgagccaggcctacttcgacgtgctcgccagccaggacagcctg
gccctggtgcgcgcgcaaaaagtcgccgtggccgagcagcttgcgtcggccaagcgcaac
ttcgaagtcggcacctccaccatcaccgactcgcgcgaggcccaggcccgctacgacctg
gtgatcgcgcaagagatcgccgccgagaacgacctgcaggtcaagaagatcgtgctcgac
cagctcgtcggccgccccggcagcgtgcccgtgccgctggctgtgcccgtcgtgctgccg
acggcgcaacctgccgacatcaacacctgggtcgcgcaggccgaagaggtgcatccggcg
atccagcaggcgcgcctgggcctggacgtggccgggctcgaagtgcagaaggcgcaggcc
ggccacaagcccacgctcgatgccaacctgggctacaacgtcacgcgcaacccgaccggc
accagcaccagcaccgtgggcacgcgcgtcaacgccgccacggtcggcgtcaccttcaac
ctgccactgttcgcgggctttgccaccgagaaccgcatcaaggaaacgctggcgctcgaa
gaccagtcgcgcagcgtgctcgacggcacgcgccgcagcgtggcgcaggccacgcgcgcg
gcctacctcgggctggtgtcgggtgcgggccaggtgaaggcgctcgaagccgccgaagcc
tccagccagagcgcgctcgacgccaacaagctgggctaccaggtaggcgtgcgcatcaac
atcgacgtgctcaactcgcagagccagctgttccagaccaagcgcgacctcgcgcaagcg
cgctacaacgtgctgctgggcaacctgaagctgcgccaggccaacggcacgctgacgacc
gacgacatgaacgcgatcaacgcgacgctggcgcgcaatggcagcacgcctgcagtgcct
gccgcgacgacgggggcgcccgtggtgcccgtgacgccgccggccattccggtggtgccg
ccagtgccggtgcagccattcaacccgcccgcgccgacgatgccgtcggcaccgccgccg
ccggtgatcctgaatccgccggtgcgctga
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