Variovorax boronicumulans: CKY39_20160
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Entry
CKY39_20160 CDS
T05068
Name
(GenBank) 4-hydroxyphenylacetate 3-hydroxylase
KO
K14534
4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:
4.2.1.120
5.3.3.3
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00650
Butanoate metabolism
vbo00720
Other carbon fixation pathways
vbo01100
Metabolic pathways
vbo01120
Microbial metabolism in diverse environments
vbo01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CKY39_20160
09102 Energy metabolism
00720 Other carbon fixation pathways
CKY39_20160
Enzymes [BR:
vbo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.120 4-hydroxybutanoyl-CoA dehydratase
CKY39_20160
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.3 vinylacetyl-CoA Delta-isomerase
CKY39_20160
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Motif
Pfam:
HpaB_N
HpaB
Acyl-CoA_dh_M
Motif
Other DBs
NCBI-ProteinID:
ATA55271
UniProt:
A0A250DMC6
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Position
4334195..4335820
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AA seq
541 aa
AA seq
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MNAPPSDALLMSGADYRESLRRYTPTVFVDGRRVASVADEPAFQPGINAIALTYDHALKS
EYAPLMTAVQHTSGKRVNRLSHINTSSGDLLNKLEAVRLVCQETGCAQRYLTHDALNAIA
QVSARIDDARGNTEHTARFHDYLHRIQDQDLTLGVAMTDAKGDRSRRPHEQANVDSYLHV
VERNARGIVISGTKAIVTGAPYVHELLVMPCRNMGKEDADFAVCCAVPLDAPGLTIVARP
AGRPGEKLEHGDALFSRKYGQSTGVCMFDRVFVPWERVFYAGEWEHSGHLTYSYATHHRH
SCIAARAGFGDLLIGAGALMCEANGFDPGKESHLRDQMVELITITESFFACGVAASVYGK
ADEHCEVFMPDPVFSNIGKLLLATKIYDMHRIAHYVSGGLIVTLPGPDEDHNPETAARLS
DVLRANPAIPYEQRIETARFIEDLTAGYQGGWYSVISLHGGGSPAAMKQEIWRNYPVGSK
VELVERLLERGIAADGTPAAAPHDPRRAITKNRQPGKCCDTGCTVPGQPVMVDLPVPVSR
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccccgccttccgacgccctcctcatgtccggcgccgactaccgtgaatcgctg
cgccgctacacgcccaccgtgttcgtcgacggccgccgcgtcgccagcgtggccgacgag
cccgccttccagcccggcatcaacgccatcgccctcacctacgaccacgcgctcaagtcc
gagtacgcgccgctcatgaccgccgtgcagcacaccagcggcaagcgcgtgaaccggctc
tcgcacatcaacacgagttcgggcgacctgctcaacaagctcgaggccgtgcggctcgtg
tgccaggaaaccggctgcgcccagcgctacctgacgcacgacgcgctcaacgccatcgcc
caggtgtcggcccgcatcgacgacgcgcgcggcaacaccgagcacaccgcgcgcttccac
gactacctgcaccgcatccaggaccaggacctgacgctgggcgtcgccatgaccgacgcc
aagggcgaccgcagccgccggccgcacgagcaggcgaacgtcgacagctacttgcacgtg
gtcgagcgcaacgcgcgcggcatcgtcatttcgggcacaaaagccatcgtgaccggcgcg
ccctacgtgcacgagttgctggtcatgccctgccggaacatgggcaaggaagacgccgac
ttcgccgtctgctgcgccgtgccgctcgatgcgcccgggctcaccatcgtcgcgcggccg
gccggtcggcccggcgaaaagctggagcacggcgatgcgctcttcagccgcaagtacggc
cagagcaccggcgtgtgcatgttcgaccgcgtgttcgtgccgtgggagcgcgtgttctat
gccggcgaatgggagcactcgggccacctgacctacagctacgccacgcaccaccgccac
agctgcatcgcggcccgcgccggcttcggcgacctgctgatcggcgccggcgcactcatg
tgcgaggccaacggcttcgaccccggcaaggagagccacctgcgcgatcagatggtcgag
ctcatcaccatcaccgagagcttctttgcctgcggcgtggcggccagcgtctatggcaag
gccgacgagcattgcgaggtcttcatgcccgacccggtgttcagcaacattggcaagctg
ctgctggccacgaagatctacgacatgcaccgcatcgcccactacgtgagcggcggcctc
atcgtcaccctgcccggccccgacgaagaccacaaccccgagaccgcggcgcggctgtcc
gacgtgttgcgtgccaaccccgccattccctacgagcagcgcatcgagacggcccgcttc
atcgaagacctcacggctggctaccagggcggctggtacagcgtgatcagcctgcacggc
ggcggctcgccggcggcgatgaagcaggagatctggcgcaactacccggtcggctcgaag
gtcgagctggtcgagcgcctgctcgagcgcggcatcgcggccgacggcacgccggccgcc
gcgccgcacgacccgcgccgcgccatcacgaagaaccgccagcccggcaagtgctgcgac
accggctgcaccgtgccgggacagcccgtgatggtcgacctgccggttccggtgtcgcgc
gcctag
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