Vibrio cholerae O1 2010EL-1786: Vch1786_I1927
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Entry
Vch1786_I1927 CDS
T01650
Symbol
tolC
Name
(GenBank) outer membrane channel protein
KO
K12340
outer membrane protein
Organism
vce
Vibrio cholerae O1 2010EL-1786
Pathway
vce01501
beta-Lactam resistance
vce01503
Cationic antimicrobial peptide (CAMP) resistance
vce02020
Two-component system
vce03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vce00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Vch1786_I1927 (tolC)
09132 Signal transduction
02020 Two-component system
Vch1786_I1927 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Vch1786_I1927 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
Vch1786_I1927 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vce02000
]
Vch1786_I1927 (tolC)
02044 Secretion system [BR:
vce02044
]
Vch1786_I1927 (tolC)
01504 Antimicrobial resistance genes [BR:
vce01504
]
Vch1786_I1927 (tolC)
Transporters [BR:
vce02000
]
Other transporters
Pores ion channels [TC:
1
]
Vch1786_I1927 (tolC)
Secretion system [BR:
vce02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Vch1786_I1927 (tolC)
RTX toxin transporter
Vch1786_I1927 (tolC)
Multiple protein transporter
Vch1786_I1927 (tolC)
RaxAB-RaxC type I secretion system protein
Vch1786_I1927 (tolC)
Antimicrobial resistance genes [BR:
vce01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Vch1786_I1927 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Vch1786_I1927 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
LntA_helical
Motif
Other DBs
NCBI-ProteinID:
AET27519
LinkDB
All DBs
Position
1:2080704..2082020
Genome browser
AA seq
438 aa
AA seq
DB search
MKKLLPLFVSAALGTLSSAVWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSAL
LPQINLTAGYNINRSDQAPRESDLLSAGINFSQELYQRSSWVSLDTAEKKARQADSQYAA
TQQGLILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGLSAITDVHDAQAQ
FDGVLADEVLAENSLTNSYEALREITGQEYSKLAVLDTKRFAASRTTESSEALIEKAQQQ
NLSLLAARISQDVARDNISLASSGHLPSLTLDGGYNYGNNSNDNAKNTSGEEYNDFKIGV
NLKVPLYTGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAYNNNINASIGALRAYEQ
AVISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNARYDYILSVLQLRQAIGT
LSEQDVMDVNAGLKVAKK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactgcttccattatttgttagtgctgcgctaggcacactaagctctgccgtt
tgggcagaaaacctggcagagatttataaccaagcaaaagaaaatgatccccaattactc
agcgtagcggctcaacgtgatgctgcgtttgaagcggtgacttctagccgtagtgccctt
ttaccgcaaattaatctgacggcgggttacaacatcaaccgcagtgatcaagccccacgc
gaaagtgatcttctctctgcaggcatcaacttttcacaagaactgtaccaacgttctagc
tgggtaagcttagatacggctgagaaaaaagcccgccaagcagactctcaatacgctgcc
acgcaacaaggcttaatcttacgtgtggcgaaggcttattttgaagtgctccgcgctcaa
gataaccttgaattcgtgcgcgcagaaaaagccgccgtgggtcgccaattagagcaaacc
aaacaacgctttgaagtcggtttgtcagcgattaccgacgtacatgatgcacaggcacaa
ttcgatggtgtattagccgatgaagtgttggcggaaaacagcctcaccaatagctatgaa
gctctgcgtgaaattacgggtcaggaatactctaagcttgcggtactcgataccaaacga
tttgcggcgagtcgtacgaccgaatcaagcgaagcgttgatcgaaaaagcgcaacagcaa
aatttatcgctgcttgctgctcgtatcagtcaagatgtcgcacgtgacaacatttcgctt
gccagctctggccatctgccatcactgaccttagatggtggttacaactatggcaacaat
agcaacgacaatgcgaaaaacacttcaggcgaagagtacaacgatttcaaaatcggcgtg
aacctcaaagtaccgctgtacacaggtggcaacaccacgtcactgaccaagcaggctgaa
tttgcgtatgtagccgccagccaagatctggaagccgcttaccgctcagtggttaaagat
gtgcgtgcatacaacaacaacatcaacgcttcaattggtgcactgcgtgcttatgagcag
gcagtgatttctgcgaagtcagcactggaagcgaccgaagcaggttttgatgtcggtacg
cgtaccattgtcgatgtactcgatgccacacgtcgcctgtatgatgcgaacaaaaatctc
tcgaatgctcgctatgactacattctcagtgtgctgcaattgcgccaagcgattggtact
ctgagtgagcaagacgtgatggatgtcaacgcaggcctaaaagtcgcgaagaagtaa
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