KEGG   Vibrio cholerae O1 El Tor FJ147: IR04_13045
Entry
IR04_13045        CDS       T03827                                 
Name
(GenBank) membrane protein
  KO
K12340  outer membrane protein
Organism
vcf  Vibrio cholerae O1 El Tor FJ147
Pathway
vcf01501  beta-Lactam resistance
vcf01503  Cationic antimicrobial peptide (CAMP) resistance
vcf02020  Two-component system
vcf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vcf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    IR04_13045
  09132 Signal transduction
   02020 Two-component system
    IR04_13045
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    IR04_13045
   01503 Cationic antimicrobial peptide (CAMP) resistance
    IR04_13045
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vcf02000]
    IR04_13045
   02044 Secretion system [BR:vcf02044]
    IR04_13045
   01504 Antimicrobial resistance genes [BR:vcf01504]
    IR04_13045
Transporters [BR:vcf02000]
 Other transporters
  Pores ion channels [TC:1]
   IR04_13045
Secretion system [BR:vcf02044]
 Type I secretion system
  alpha-Hemolysin/cyclolysin transporter
   IR04_13045
  RTX toxin transporter
   IR04_13045
  Multiple protein transporter
   IR04_13045
  RaxAB-RaxC type I secretion system protein
   IR04_13045
Antimicrobial resistance genes [BR:vcf01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump AcrEF-TolC [MD:M00696]
    IR04_13045
   Multidrug resistance, efflux pump MdtEF-TolC [MD:M00697]
    IR04_13045
SSDB
Motif
Pfam: OEP HMG_box_2 DUF1127
Other DBs
NCBI-ProteinID: AKA00045
LinkDB
Position
I:1760038..1761297
AA seq 419 aa
MNKGFLTACVLTSLMASSSAFALSIEQAWQQAKQQSPDAHIAELSVQLSEQDKYLAKSDL
LPSLSGSAGMNWSESQNGSSSYGATIEQTLWDSRKWSALDKADADWVLAQLERNQAYNQL
AHQLLSAYFALAEAQSNLTLAQQKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQLDEE
STILNAQAELETKRSQLSILINASAPQVDEVDTQTPTPSWPFSAELDDWLTAAKDHSPEL
LIAIQKVAISQIAKQQSQSGYYPSLRASAGYQDGDQRNGEFNAGLTLSIPIDLNGATRSD
NEKAHLNWLMAQQQQRKVEIGLHQNLRQQIQQVEIEWQQITMADQQVTHRDKVLRSKQQL
FDAGLAEASDLIDVHNSLFRAKHNLASRWYSYWRQRIELLKLTGQLNDNAIAQLSGAFR
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgaataagggctttctcaccgcatgtgtactgactagcctgatggcatcttcttctgct
tttgcgctctccatcgagcaagcgtggcagcaagccaagcaacaatcacccgatgcacac
attgccgaactctcggtgcagctcagcgagcaagataagtatctcgccaaaagcgatctc
cttccttcactctcaggcagtgccggaatgaactggtcagaaagccaaaatggctcgagc
agttatggcgccaccattgagcaaaccttgtgggatagccgaaaatggagcgcgttggat
aaagccgatgcggactgggtgttggcccaacttgaacgtaaccaagcttataaccaactc
gctcatcagttactcagtgcttattttgccttagcggaagcgcaaagtaatttgactctt
gcccagcaaaaacaagcggatggcgcacaattattagccatcgctgaacagcgttatctg
gcgggtaaaataaaatctgtggagttggaagagctacgcgtcaaccaacttgatgaagag
tcaaccattctcaatgcgcaggcggaactcgaaaccaaacgcagccaactctcaatactg
atcaatgcctcagccccgcaagtggatgaagtggatacccagacgccaacaccgagttgg
ccattcagtgctgaactggatgactggcttaccgccgccaaagatcatagccctgagctc
ttgattgctatccaaaaagtggcgatcagccaaattgctaagcagcagagtcaaagtggg
tattatccgagtttgcgcgcctctgcaggctatcaagacggcgatcaacgaaacggtgaa
ttcaatgccggtctcacgctctccatcccgattgatttaaatggagcaacccgcagtgat
aacgaaaaagctcatctcaactggttgatggctcagcaacagcaacgcaaagtcgagatc
ggattacatcaaaatttgcgtcaacaaattcagcaggttgagattgaatggcagcaaatt
accatggcggatcagcaagtgacccatcgcgataaagtgctgcgcagtaaacagcaactg
tttgatgctggcttagccgaagcctccgatttaatcgatgtgcacaacagcctatttcga
gccaaacataatctggccagtcgttggtatagctattggcgtcagcgcattgagctactc
aaattaacaggtcagttgaacgataatgccatcgctcagctttcaggagcctttcgttaa

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