Vibrio cholerae O1 El Tor FJ147: IR04_13045
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Entry
IR04_13045 CDS
T03827
Name
(GenBank) membrane protein
KO
K12340
outer membrane protein
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf01501
beta-Lactam resistance
vcf01503
Cationic antimicrobial peptide (CAMP) resistance
vcf02020
Two-component system
vcf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
IR04_13045
09132 Signal transduction
02020 Two-component system
IR04_13045
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IR04_13045
01503 Cationic antimicrobial peptide (CAMP) resistance
IR04_13045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcf02000
]
IR04_13045
02044 Secretion system [BR:
vcf02044
]
IR04_13045
01504 Antimicrobial resistance genes [BR:
vcf01504
]
IR04_13045
Transporters [BR:
vcf02000
]
Other transporters
Pores ion channels [TC:
1
]
IR04_13045
Secretion system [BR:
vcf02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
IR04_13045
RTX toxin transporter
IR04_13045
Multiple protein transporter
IR04_13045
RaxAB-RaxC type I secretion system protein
IR04_13045
Antimicrobial resistance genes [BR:
vcf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
IR04_13045
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
IR04_13045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
HMG_box_2
DUF1127
Motif
Other DBs
NCBI-ProteinID:
AKA00045
LinkDB
All DBs
Position
I:1760038..1761297
Genome browser
AA seq
419 aa
AA seq
DB search
MNKGFLTACVLTSLMASSSAFALSIEQAWQQAKQQSPDAHIAELSVQLSEQDKYLAKSDL
LPSLSGSAGMNWSESQNGSSSYGATIEQTLWDSRKWSALDKADADWVLAQLERNQAYNQL
AHQLLSAYFALAEAQSNLTLAQQKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQLDEE
STILNAQAELETKRSQLSILINASAPQVDEVDTQTPTPSWPFSAELDDWLTAAKDHSPEL
LIAIQKVAISQIAKQQSQSGYYPSLRASAGYQDGDQRNGEFNAGLTLSIPIDLNGATRSD
NEKAHLNWLMAQQQQRKVEIGLHQNLRQQIQQVEIEWQQITMADQQVTHRDKVLRSKQQL
FDAGLAEASDLIDVHNSLFRAKHNLASRWYSYWRQRIELLKLTGQLNDNAIAQLSGAFR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaataagggctttctcaccgcatgtgtactgactagcctgatggcatcttcttctgct
tttgcgctctccatcgagcaagcgtggcagcaagccaagcaacaatcacccgatgcacac
attgccgaactctcggtgcagctcagcgagcaagataagtatctcgccaaaagcgatctc
cttccttcactctcaggcagtgccggaatgaactggtcagaaagccaaaatggctcgagc
agttatggcgccaccattgagcaaaccttgtgggatagccgaaaatggagcgcgttggat
aaagccgatgcggactgggtgttggcccaacttgaacgtaaccaagcttataaccaactc
gctcatcagttactcagtgcttattttgccttagcggaagcgcaaagtaatttgactctt
gcccagcaaaaacaagcggatggcgcacaattattagccatcgctgaacagcgttatctg
gcgggtaaaataaaatctgtggagttggaagagctacgcgtcaaccaacttgatgaagag
tcaaccattctcaatgcgcaggcggaactcgaaaccaaacgcagccaactctcaatactg
atcaatgcctcagccccgcaagtggatgaagtggatacccagacgccaacaccgagttgg
ccattcagtgctgaactggatgactggcttaccgccgccaaagatcatagccctgagctc
ttgattgctatccaaaaagtggcgatcagccaaattgctaagcagcagagtcaaagtggg
tattatccgagtttgcgcgcctctgcaggctatcaagacggcgatcaacgaaacggtgaa
ttcaatgccggtctcacgctctccatcccgattgatttaaatggagcaacccgcagtgat
aacgaaaaagctcatctcaactggttgatggctcagcaacagcaacgcaaagtcgagatc
ggattacatcaaaatttgcgtcaacaaattcagcaggttgagattgaatggcagcaaatt
accatggcggatcagcaagtgacccatcgcgataaagtgctgcgcagtaaacagcaactg
tttgatgctggcttagccgaagcctccgatttaatcgatgtgcacaacagcctatttcga
gccaaacataatctggccagtcgttggtatagctattggcgtcagcgcattgagctactc
aaattaacaggtcagttgaacgataatgccatcgctcagctttcaggagcctttcgttaa
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