Vibrio cholerae O1 MJ-1236: VCD_002811
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Entry
VCD_002811 CDS
T00903
Name
(GenBank) outer membrane protein
KO
K12340
outer membrane protein
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj01501
beta-Lactam resistance
vcj01503
Cationic antimicrobial peptide (CAMP) resistance
vcj02020
Two-component system
vcj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VCD_002811
09132 Signal transduction
02020 Two-component system
VCD_002811
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VCD_002811
01503 Cationic antimicrobial peptide (CAMP) resistance
VCD_002811
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcj02000
]
VCD_002811
02044 Secretion system [BR:
vcj02044
]
VCD_002811
01504 Antimicrobial resistance genes [BR:
vcj01504
]
VCD_002811
Transporters [BR:
vcj02000
]
Other transporters
Pores ion channels [TC:
1
]
VCD_002811
Secretion system [BR:
vcj02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
VCD_002811
RTX toxin transporter
VCD_002811
Multiple protein transporter
VCD_002811
RaxAB-RaxC type I secretion system protein
VCD_002811
Antimicrobial resistance genes [BR:
vcj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
VCD_002811
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
VCD_002811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
HMG_box_2
DUF1127
Motif
Other DBs
NCBI-ProteinID:
ACQ60973
LinkDB
All DBs
Position
1:complement(1987187..1988446)
Genome browser
AA seq
419 aa
AA seq
DB search
MNKGFLTACVLTSLMASSSAFALSIEQAWQQAKQQSPDAHIAELSVQLSEQDKYLAKSDL
LPSLSGSAGMNWSESQNGSSSYGATIEQTLWDSRKWSALDKADADWVLAQLERNQAYNQL
AHQLLSAYFALAEAQSNLTLAQQKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQLDEE
STILNAQAELETKRSQLSILINASAPQVDEVDTQTPTPSWPFSAELDDWLTAAKDHSPEL
LIAIQKVAISQIAKQQSQSGYYPSLRASAGYQDGDQRNGEFNAGLTLSIPIDLNGATRSD
NEKAHLNWLMAQQQQRKVEIGLHQNLRQQIQQVEIEWQQITMADQQVTHRDKVLRSKQQL
FDAGLAEASDLIDVHNSLFRAKHNLASRWYSYWRQRIELLKLTGQLNDNAIAQLSGAFR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaataagggctttctcaccgcatgtgtactgactagcctgatggcatcttcttctgct
tttgcgctctccatcgagcaagcgtggcagcaagccaagcaacaatcacccgatgcacac
attgccgaactctcggtgcagctcagcgagcaagataagtatctcgccaaaagcgatctc
cttccttcactctcaggcagtgccggaatgaactggtcagaaagccaaaatggctcgagc
agttatggcgccaccattgagcaaaccttgtgggatagccgaaaatggagcgcgttggat
aaagccgatgcggactgggtgttggcccaacttgaacgtaaccaagcttataaccaactc
gctcatcagttactcagtgcttattttgccttagcggaagcgcaaagtaatttgactctt
gcccagcaaaaacaagcggatggcgcacaattattagccatcgctgaacagcgttatctg
gcgggtaaaataaaatctgtggagttggaagagctacgcgtcaaccaacttgatgaagag
tcaaccattctcaatgcgcaggcggaactcgaaaccaaacgcagccaactctcaatactg
atcaatgcctcagccccgcaagtggatgaagtggatacccagacgccaacaccgagttgg
ccattcagtgctgaactggatgactggcttaccgccgccaaagatcatagccctgagctc
ttgattgctatccaaaaagtggcgatcagccaaattgctaagcagcagagtcaaagtggg
tattatccgagtttgcgcgcctctgcaggctatcaagacggcgatcaacgaaacggtgaa
ttcaatgccggtctcacgctctccatcccgattgatttaaatggagcaacccgcagtgat
aacgaaaaagctcatctcaactggttgatggctcagcaacagcaacgcaaagtcgagatc
ggattacatcaaaatttgcgtcaacaaattcagcaggttgagattgaatggcagcaaatt
accatggcggatcagcaagtgacccatcgcgataaagtgctgcgcagtaaacagcaactg
tttgatgctggcttagccgaagcctccgatttaatcgatgtgcacaacagcctatttcga
gccaaacataatctggccagtcgttggtatagctattggcgtcagcgcattgagctactc
aaattaacaggtcagttgaacgataatgccatcgctcagctttcaggagcctttcgttaa
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