KEGG   Vibrio cholerae O1 MJ-1236: VCD_002811
Entry
VCD_002811        CDS       T00903                                 
Name
(GenBank) outer membrane protein
  KO
K12340  outer membrane protein
Organism
vcj  Vibrio cholerae O1 MJ-1236
Pathway
vcj01501  beta-Lactam resistance
vcj01503  Cationic antimicrobial peptide (CAMP) resistance
vcj02020  Two-component system
vcj03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vcj00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VCD_002811
  09132 Signal transduction
   02020 Two-component system
    VCD_002811
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    VCD_002811
   01503 Cationic antimicrobial peptide (CAMP) resistance
    VCD_002811
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vcj02000]
    VCD_002811
   02044 Secretion system [BR:vcj02044]
    VCD_002811
   01504 Antimicrobial resistance genes [BR:vcj01504]
    VCD_002811
Transporters [BR:vcj02000]
 Other transporters
  Pores ion channels [TC:1]
   VCD_002811
Secretion system [BR:vcj02044]
 Type I secretion system
  alpha-Hemolysin/cyclolysin transporter
   VCD_002811
  RTX toxin transporter
   VCD_002811
  Multiple protein transporter
   VCD_002811
  RaxAB-RaxC type I secretion system protein
   VCD_002811
Antimicrobial resistance genes [BR:vcj01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump AcrEF-TolC [MD:M00696]
    VCD_002811
   Multidrug resistance, efflux pump MdtEF-TolC [MD:M00697]
    VCD_002811
SSDB
Motif
Pfam: OEP HMG_box_2 DUF1127
Other DBs
NCBI-ProteinID: ACQ60973
LinkDB
Position
1:complement(1987187..1988446)
AA seq 419 aa
MNKGFLTACVLTSLMASSSAFALSIEQAWQQAKQQSPDAHIAELSVQLSEQDKYLAKSDL
LPSLSGSAGMNWSESQNGSSSYGATIEQTLWDSRKWSALDKADADWVLAQLERNQAYNQL
AHQLLSAYFALAEAQSNLTLAQQKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQLDEE
STILNAQAELETKRSQLSILINASAPQVDEVDTQTPTPSWPFSAELDDWLTAAKDHSPEL
LIAIQKVAISQIAKQQSQSGYYPSLRASAGYQDGDQRNGEFNAGLTLSIPIDLNGATRSD
NEKAHLNWLMAQQQQRKVEIGLHQNLRQQIQQVEIEWQQITMADQQVTHRDKVLRSKQQL
FDAGLAEASDLIDVHNSLFRAKHNLASRWYSYWRQRIELLKLTGQLNDNAIAQLSGAFR
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgaataagggctttctcaccgcatgtgtactgactagcctgatggcatcttcttctgct
tttgcgctctccatcgagcaagcgtggcagcaagccaagcaacaatcacccgatgcacac
attgccgaactctcggtgcagctcagcgagcaagataagtatctcgccaaaagcgatctc
cttccttcactctcaggcagtgccggaatgaactggtcagaaagccaaaatggctcgagc
agttatggcgccaccattgagcaaaccttgtgggatagccgaaaatggagcgcgttggat
aaagccgatgcggactgggtgttggcccaacttgaacgtaaccaagcttataaccaactc
gctcatcagttactcagtgcttattttgccttagcggaagcgcaaagtaatttgactctt
gcccagcaaaaacaagcggatggcgcacaattattagccatcgctgaacagcgttatctg
gcgggtaaaataaaatctgtggagttggaagagctacgcgtcaaccaacttgatgaagag
tcaaccattctcaatgcgcaggcggaactcgaaaccaaacgcagccaactctcaatactg
atcaatgcctcagccccgcaagtggatgaagtggatacccagacgccaacaccgagttgg
ccattcagtgctgaactggatgactggcttaccgccgccaaagatcatagccctgagctc
ttgattgctatccaaaaagtggcgatcagccaaattgctaagcagcagagtcaaagtggg
tattatccgagtttgcgcgcctctgcaggctatcaagacggcgatcaacgaaacggtgaa
ttcaatgccggtctcacgctctccatcccgattgatttaaatggagcaacccgcagtgat
aacgaaaaagctcatctcaactggttgatggctcagcaacagcaacgcaaagtcgagatc
ggattacatcaaaatttgcgtcaacaaattcagcaggttgagattgaatggcagcaaatt
accatggcggatcagcaagtgacccatcgcgataaagtgctgcgcagtaaacagcaactg
tttgatgctggcttagccgaagcctccgatttaatcgatgtgcacaacagcctatttcga
gccaaacataatctggccagtcgttggtatagctattggcgtcagcgcattgagctactc
aaattaacaggtcagttgaacgataatgccatcgctcagctttcaggagcctttcgttaa

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