Vibrio crassostreae: IS519_22160
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Entry
IS519_22160 CDS
T08776
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
vcra
Vibrio crassostreae
Pathway
vcra01501
beta-Lactam resistance
vcra01503
Cationic antimicrobial peptide (CAMP) resistance
vcra02020
Two-component system
vcra03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
IS519_22160
09132 Signal transduction
02020 Two-component system
IS519_22160
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IS519_22160
01503 Cationic antimicrobial peptide (CAMP) resistance
IS519_22160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcra02000
]
IS519_22160
02044 Secretion system [BR:
vcra02044
]
IS519_22160
01504 Antimicrobial resistance genes [BR:
vcra01504
]
IS519_22160
Transporters [BR:
vcra02000
]
Other transporters
Pores ion channels [TC:
1
]
IS519_22160
Secretion system [BR:
vcra02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
IS519_22160
RTX toxin transporter
IS519_22160
Multiple protein transporter
IS519_22160
RaxAB-RaxC type I secretion system protein
IS519_22160
Antimicrobial resistance genes [BR:
vcra01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
IS519_22160
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
IS519_22160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UPR31561
LinkDB
All DBs
Position
2:1310109..1311533
Genome browser
AA seq
474 aa
AA seq
DB search
MWRYRNLTSSIIAALAFNTTPSASATTLLEAVELGLQNSLSLRASDKGVEENEYNIGISR
SKFLPSLNGAADTTWNENETLLSSVPDETSSYNSNSYSLSLSQSIFNFGDIFKYGTAKLD
FNIEEIKHENKIQSTISEIGSQYFEYLKNNAQIKATKVELKSSETREHQMRRNVELGNTA
ASELYEVIAQKEGVSNRLRTLQKDRRVILNGLSIQIQYPITPSQDIYESVPLKEINETEQ
RTIMDQALKLNNDLLVARKNVERSRRSLKESGSNFLPTVSLSASYRHDDANNYDKTDITA
TGESNSTSVGLNLAVPILSGGSDYYGYQKSSTAIERTELLYQDSLYTTRNSVNTSVLNIN
DFSQSISSYENIIRANYASYKGIQRAYQLGTRTITDLLAAESKLFSALRDYESARYDYII
ETIKLEQIKGILSIQSIESVMQLMSDIEGRDNQDLVPKHLLSTESLRKGGRNAN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtggcggtacagaaacttaactagcagcatcatagctgcactcgcattcaacacgaca
ccttcagcatcagcgactaccctgcttgaggcggtagaactcggcctgcaaaacagcctg
tctcttcgcgccagtgataaaggtgttgaagaaaacgagtacaacattggtatcagtcgc
tctaaatttctgccttcactcaatggtgctgccgataccacatggaacgagaatgaaacc
ttgctatcgagcgtgccggatgaaacctctagctataactcaaatagttacagcctttcg
ttatcccaatccatattcaactttggtgacattttcaaatatgggacagcgaagctcgac
ttcaatatcgaagagattaaacacgagaacaaaatccaaagcaccatttcggaaatcggg
tctcaatactttgagtatttaaaaaacaacgcccaaattaaagcgactaaggttgaactt
aaatcgtccgaaacgcgtgaacaccaaatgcgacgcaatgtagagctgggtaacaccgca
gccagtgagctatacgaagtaattgctcagaaagaaggtgtgtcgaaccgattgagaacc
ttgcagaaagatcgtcgtgtcattctcaacgggctctctattcaaattcaatatcctatt
actccatcgcaagacatatacgaaagcgtgcctttgaaagagatcaacgaaaccgaacaa
cgcacgatcatggatcaggcgttaaagctcaataacgacttgttggtagcaaggaaaaac
gtagaaagaagccgcagaagcttaaaagagagcggttcgaacttcttaccgaccgtatcg
ctttcagccagctatcgacacgatgacgccaataactacgacaaaaccgacattacagca
acgggtgaaagtaactcaaccagtgttggattaaacctcgctgtgcctatcttgtccggt
ggctctgattactatggctatcaaaaatcatcgacggccatcgaacgtaccgaactgctt
tatcaagactcgctttataccacacgtaacagcgtgaatacctcagtgctcaacattaac
gatttctcgcagtctataagcagttacgaaaacatcattcgcgccaactacgcgtcttat
aaagggatccaaagagcctaccaattaggcacgcgtaccatcaccgatttgctggcggcg
gaaagtaaactgttcagcgcgttaagagactacgaaagcgcacgatacgactacatcatc
gagaccatcaagcttgagcaaattaagggcatactttcgattcaatctatcgaaagcgtg
atgcaattaatgagcgatattgaaggtcgcgacaatcaagatttggtgccgaaacatctt
ctctcaacggagtcattgaggaaaggaggtcgtaatgcaaactga
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