Vibrio cholerae O49 1154-74: VAA049_1236
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Entry
VAA049_1236 CDS
T03828
Name
(GenBank) outer membrane efflux family protein
KO
K12340
outer membrane protein
Organism
vcx
Vibrio cholerae O49 1154-74
Pathway
vcx01501
beta-Lactam resistance
vcx01503
Cationic antimicrobial peptide (CAMP) resistance
vcx02020
Two-component system
vcx03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VAA049_1236
09132 Signal transduction
02020 Two-component system
VAA049_1236
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VAA049_1236
01503 Cationic antimicrobial peptide (CAMP) resistance
VAA049_1236
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcx02000
]
VAA049_1236
02044 Secretion system [BR:
vcx02044
]
VAA049_1236
01504 Antimicrobial resistance genes [BR:
vcx01504
]
VAA049_1236
Transporters [BR:
vcx02000
]
Other transporters
Pores ion channels [TC:
1
]
VAA049_1236
Secretion system [BR:
vcx02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
VAA049_1236
RTX toxin transporter
VAA049_1236
Multiple protein transporter
VAA049_1236
RaxAB-RaxC type I secretion system protein
VAA049_1236
Antimicrobial resistance genes [BR:
vcx01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
VAA049_1236
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
VAA049_1236
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OEP
YjiS-like
Motif
Other DBs
NCBI-ProteinID:
AKB04272
LinkDB
All DBs
Position
complement(1353172..1354431)
Genome browser
AA seq
419 aa
AA seq
DB search
MNKSFLSACVLTSLMASSSALALSIEQAWQQAKQQSPDAHIAELSVQLSVQDKYLAKSDL
LPSLSGSAGMNWSESQNGSSSYGATIEQTLWDSRKWSALDKADADWVLAQLERNQAYNQL
AHQLLSAYFALAEAQSNLTLAQQKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQLDEE
STILNAQAELETKRSQLSILINASAPQVDEVDTHTPTPSWPFSAELDDWLTAAKDHSPEL
LIAIQKVAISQIAKQQSQSGYYPSLRASAGYQDGDQRNGEFNAGLTLSIPIDLNGATRSD
NEKAHLNWLMAQQQQRKVEIGLDQNLRQQIQQVEIEWQQITMADQQVTHRDKVLRSKQQL
FDAGLAEASDLIDAHNSLFRAKHNLASRWYSYWRQRIELLKLTGQLNDNAIAQLSGAFR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaataagagctttctctccgcgtgtgtactgactagcctgatggcatcttcttctgct
ttagcgctctccatcgagcaagcgtggcagcaagccaaacaacagtcacccgatgcacac
attgccgaactctcggtgcagctcagcgtgcaagataagtatctcgccaaaagcgatctc
cttccttcactctcaggtagtgccggaatgaactggtcagaaagccaaaatggatcgagc
agttatggtgccaccattgagcaaaccttgtgggatagccgaaaatggagcgcgttggat
aaagccgatgcggactgggtgttagctcaacttgaacgtaaccaagcttataaccagctc
gctcatcagttactcagtgcttattttgccttagcggaagcgcaaagtaatttgactctt
gcccagcaaaaacaagcggatggcgcacaattattagccatcgctgaacagcgttatctg
gcgggtaaaataaaatctgtggagttggaagagctacgcgtcaaccaacttgatgaagag
tcaaccattctcaatgcgcaggcggaactcgaaaccaaacgcagccaactctcaatactg
atcaatgcctcagccccgcaagtggatgaagtggatacccacacgccaacaccgagttgg
ccattcagtgctgagctggatgactggcttaccgccgccaaagatcatagccctgagctc
ttgattgctatccaaaaagtggcgatcagccaaattgctaagcagcagagtcaaagtggg
tattatccgagtttgcgcgcctctgcaggctatcaagacggcgatcaacgaaacggtgaa
ttcaatgccggtctcacgctctccatcccaattgatttaaatggagcaacccgcagtgat
aacgaaaaagctcatctcaactggttgatggctcagcaacagcaacgcaaagtcgagatc
ggattagatcaaaatttgcgtcaacaaattcagcaggttgagattgaatggcagcaaatt
accatggcggatcagcaagtgacccatcgcgataaagtgctgcgcagtaaacagcaactg
tttgatgctggcttagccgaagcctccgatttaatcgatgcgcacaacagcctatttcga
gccaaacataatctggccagtcgttggtatagctattggcgtcagcgcattgagctactc
aaattaacaggtcagttgaacgataatgccatcgctcagctttcaggagcctttcgttaa
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