Vibrio cholerae O27 10432-62: VAB027_2254
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Entry
VAB027_2254 CDS
T03829
Name
(GenBank) outer membrane efflux family protein
KO
K12340
outer membrane protein
Organism
vcz
Vibrio cholerae O27 10432-62
Pathway
vcz01501
beta-Lactam resistance
vcz01503
Cationic antimicrobial peptide (CAMP) resistance
vcz02020
Two-component system
vcz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VAB027_2254
09132 Signal transduction
02020 Two-component system
VAB027_2254
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VAB027_2254
01503 Cationic antimicrobial peptide (CAMP) resistance
VAB027_2254
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcz02000
]
VAB027_2254
02044 Secretion system [BR:
vcz02044
]
VAB027_2254
01504 Antimicrobial resistance genes [BR:
vcz01504
]
VAB027_2254
Transporters [BR:
vcz02000
]
Other transporters
Pores ion channels [TC:
1
]
VAB027_2254
Secretion system [BR:
vcz02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
VAB027_2254
RTX toxin transporter
VAB027_2254
Multiple protein transporter
VAB027_2254
RaxAB-RaxC type I secretion system protein
VAB027_2254
Antimicrobial resistance genes [BR:
vcz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
VAB027_2254
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
VAB027_2254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Ycf4
RestrictionMunI
Baculo_PEP_C
Motif
Other DBs
NCBI-ProteinID:
AKB06765
LinkDB
All DBs
Position
2439210..2440628
Genome browser
AA seq
472 aa
AA seq
DB search
MKVKSLSLAICSILFMPIAHAAPLSFQEAWDLLQQQNNSLAAQRANVERYAHLKDATQNL
NLPSVSVGANFTRLDQDVTLSGKQIFDSTGQELPALPPTLAQLVAGIGSIQSTITERDIF
TSSIRAIWPIFTGGRITAAQDAAAGKEDEAQSQLAMEIQARYEDLAKYYFSVVLAKEVLA
TRIAVEEGLTQHRDNALKLEQQGQIAHVERLQADASLDKAKVERKKAQKTLDIAQSALTQ
ILGATETVEPSGMLFINTSLPPMHAFIEQTLNTYPGLSLLDAKEKQASSLIKAEQGKYYP
EVYLYGDYSLHEDDSLASQMKPDWLIGVGVNIPLIENTGRSEQVKAANSAVNQVRYLKAQ
AKQDLSVLVEKTYLEAEQALEEVTGLNSSLNLAQENLRLRQKAFSQGLSTSVDVVDAELY
LASIRTQQSLASFNYLISLNKLLALSSEMSSFSTYHQSAVALSSLHQSATAK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgaaatctctctctctggcgatctgctctatattatttatgccgattgctcat
gcagcgcctctctcatttcaagaagcttgggacttgctgcaacaacaaaacaactcgctt
gcggcgcaaagagccaatgtggaacgttacgctcatctgaaagatgccacacaaaatctc
aatctaccctcggtcagtgtgggagccaattttacgcggcttgatcaggatgtaacactt
tccggcaagcagatttttgatagtacgggtcaggaactgcctgcacttcctccaacactt
gctcaattggttgcgggtattggctctattcaatctaccatcactgaacgcgatattttc
acttcctcgatccgtgcgatttggccaatttttactggcggacgaattacagctgcgcaa
gatgccgctgcaggtaaagaagatgaagcgcaaagccagctcgcgatggaaatacaagcg
cgatatgaagatttagccaaatattactttagcgtggtgttggccaaagaggtgctcgct
acccgaattgcggttgaagaaggactcacgcaacacagagataatgcccttaaacttgag
caacaaggacaaattgctcatgtcgagcgcctgcaagccgatgcatcactggataaagct
aaagttgagcgtaaaaaagcacaaaaaaccttggacattgcgcaaagtgcgctaacccaa
attttaggcgctacagaaaccgtagaaccaagtggcatgctgttcatcaataccagctta
ccgcccatgcacgccttcatcgaacaaacactcaatacctatcccggcttaagcctgctc
gatgccaaagaaaagcaagccagcagcctcattaaagctgagcaagggaaatactaccca
gaagtctatctgtatggcgattatagtttgcatgaagatgactcactcgctagtcaaatg
aaaccggattggttgattggcgttggtgtgaatattccgctgattgaaaacaccgggcgc
agtgaacaagtcaaagcagccaatagcgcagtgaatcaagtgcgctatttaaaagcgcaa
gcgaaacaagatctcagtgtgctagtggaaaagacctatctcgaggcagaacaagccctt
gaagaagtaacgggactcaattccagcctgaacttggcacaagagaacctgcgtttacgc
caaaaagcgttcagccaaggtttatccacctccgtcgatgtggtagatgccgagctttat
ctggccagcattcgcacccaacaatcgctagcgagctttaactatctaatttcactaaac
aaattattggctctgtcgagcgagatgagcagcttctccacttaccatcaatccgcagtt
gctctctcttcactgcaccaaagcgccacggctaagtaa
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