Verrucomicrobium sp. GAS474: SAMN05444156_0579
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Entry
SAMN05444156_0579 CDS
T09813
Name
(GenBank) Outer membrane protein TolC
KO
K12340
outer membrane protein
Organism
veg
Verrucomicrobium sp. GAS474
Pathway
veg01501
beta-Lactam resistance
veg01503
Cationic antimicrobial peptide (CAMP) resistance
veg02020
Two-component system
veg03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SAMN05444156_0579
09132 Signal transduction
02020 Two-component system
SAMN05444156_0579
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SAMN05444156_0579
01503 Cationic antimicrobial peptide (CAMP) resistance
SAMN05444156_0579
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
veg02000
]
SAMN05444156_0579
02044 Secretion system [BR:
veg02044
]
SAMN05444156_0579
01504 Antimicrobial resistance genes [BR:
veg01504
]
SAMN05444156_0579
Transporters [BR:
veg02000
]
Other transporters
Pores ion channels [TC:
1
]
SAMN05444156_0579
Secretion system [BR:
veg02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SAMN05444156_0579
RTX toxin transporter
SAMN05444156_0579
Multiple protein transporter
SAMN05444156_0579
RaxAB-RaxC type I secretion system protein
SAMN05444156_0579
Antimicrobial resistance genes [BR:
veg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
SAMN05444156_0579
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
SAMN05444156_0579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
SDT90189
UniProt:
A0A1H2E5C3
LinkDB
All DBs
Position
I:complement(681193..682551)
Genome browser
AA seq
452 aa
AA seq
DB search
MNVMRKETLFLAMGLAVLFSLSSSLFSEETPPAASPASAVSAPAATSSSLTWADCIRLAA
QNSTDLQAAREAVLNSDAVRRGAYSTLYPQMRISFGDNRSYVGPGPSSTQNYATAYQEQL
SLTQTIFDGFATKGNIEQGKAQLALAFANLNAQKAATSYSLKSSFAQLLYAQELLDISDD
VIEIRKSAALLVQRLYEGGQEDKGAMLLSQANYDKSVNDLEQARRVYVLSGRQLGTAIGK
ILPAPVTASGELLTTAPPSEGPDGKQPEFDKLAVTTPAYYQQKASVDAAAAGITQATSGW
YPTITAGVSGGRTGSDFPAEVNGWSAGLNASYPIFNGGQTYFNVKAATASFRQTLALLAS
GTNQAAMTLAQSYTNFLNARDNVRIQQEILDANVLRYRIAEARYKNGLMTFQDFNSIVDT
YVGQKKSALAARRDAVLSEASWEQARGLGAIP
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaatgcggaaggagactctcttcctcgcaatggggttggcggtcctcttttct
ctttcctcctctctcttctcggaagaaacgcctcctgcggcctcgcctgcctcggcggtc
tccgcgcctgccgcgacgtcttcctctctcacgtgggccgattgcatccgccttgccgcg
cagaacagcaccgatctccaggcggcccgcgaggcggtgctcaatagcgatgcggtgcgg
cgcggggcctactcgacgctctacccgcagatgcggatctccttcggcgacaaccggagt
tatgtcggtcccggtccttcctcgacgcagaattacgcgacggcctaccaggagcagctt
tccctcacgcagacgatcttcgacggcttcgcgacgaagggaaacatcgagcaggggaag
gcccagctcgcccttgccttcgcgaatctcaacgcgcagaaggcggcgacgagctacagc
ctgaagagctcctttgcccagctgctctacgcccaggagctcctcgacatcagcgacgac
gtgatcgagatccgcaagagcgccgccctcctcgtccagcggctctacgaggggggccag
gaagacaagggggcgatgctgctcagccaggccaattacgacaagtcggtgaacgacctc
gagcaggcccgccgcgtctacgtcctctccgggcggcagctcggcaccgccatcgggaag
atcctccccgccccggtcaccgcctcgggggagctcctcaccaccgcgcctccctccgag
gggcccgacgggaagcagcccgagttcgacaagctggcggtgacgacgcccgcctactac
cagcagaaggcctccgtcgatgccgccgccgccgggatcacccaggcgacgagcggctgg
tatccgacgatcaccgccggggtcagcggggggcggacggggagcgatttccccgccgag
gtcaacggctggtcggcggggctcaacgcctcctacccgatcttcaacggcgggcagacc
tacttcaacgtgaaggcggcgacggcctccttccggcagaccctcgccctcctcgcctcg
gggacgaaccaggcggcgatgaccctcgcgcagagctacacgaacttcctcaacgcgcgg
gacaacgtccgcatccagcaggagatcctcgacgcgaacgtcctccgctaccgcatcgcc
gaggcccgctacaagaacggcctcatgactttccaggatttcaactccatcgtcgacacc
tacgtcggccagaagaagagcgccctcgccgcccggcgggacgccgtcctctccgaggcc
tcgtgggagcaggcgcgcggcctcggcgcgattccctag
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