Aliivibrio fischeri ES114: VF_1162
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Entry
VF_1162 CDS
T00236
Name
(GenBank) outer membrane protein TolC
KO
K12340
outer membrane protein
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi01501
beta-Lactam resistance
vfi01503
Cationic antimicrobial peptide (CAMP) resistance
vfi02020
Two-component system
vfi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VF_1162
09132 Signal transduction
02020 Two-component system
VF_1162
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VF_1162
01503 Cationic antimicrobial peptide (CAMP) resistance
VF_1162
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vfi02000
]
VF_1162
02044 Secretion system [BR:
vfi02044
]
VF_1162
01504 Antimicrobial resistance genes [BR:
vfi01504
]
VF_1162
Transporters [BR:
vfi02000
]
Other transporters
Pores ion channels [TC:
1
]
VF_1162
Secretion system [BR:
vfi02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
VF_1162
RTX toxin transporter
VF_1162
Multiple protein transporter
VF_1162
RaxAB-RaxC type I secretion system protein
VF_1162
Antimicrobial resistance genes [BR:
vfi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
VF_1162
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
VF_1162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
COX2-transmemb
Motif
Other DBs
NCBI-ProteinID:
AAW85657
UniProt:
Q5E5N9
LinkDB
All DBs
Position
I:1288784..1290064
Genome browser
AA seq
426 aa
AA seq
DB search
MRDKFSEKMLFVFWALIASGLSSMSYALTIEDAWQATKQYDPEYLRSQLDEKISETTIRS
SKSALLPSARITATTAWNENSTYGIALEQIIWDSSKWSELDSSQASLLASQLKIKQSHNE
LAGRLISAYLDLAQSQGELRLAQQKFDEGRKMLRIVELRYKAGKIRSVDLEDMRSNHLDE
EANILANRLQVEDKKVRLIKLISIEPTQVNEIKTNNLSQPKLIVNSKQEWLKLASNYSPD
LLMAKQNIRISELETGKAKTGYYPTITASVGYSDNTRSDNTRSDSGLNASLNLSLPLDLN
SSIGSSVERAKLEVLRAKQDVRAVEIEIKSTISNRFNQLSLNWQRVEMAEKQVASKELVL
KSKQAIYKAGMAEASDIIEAHNSLFVSKSSLQSLLYQYWRDRISLLKSVGRLDDETITLI
SQALQS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgataaattctcagaaaagatgctcttcgttttttgggctcttattgctagtggc
ttaagttctatgagttatgcgttaactattgaagatgcatggcaagcgacaaagcaatat
gatccagagtatttacggtcgcaattagatgaaaagataagtgaaactacaatacgatca
agtaaaagtgctctacttccgagtgctaggattaccgcaactacggcttggaatgaaaat
agtacttatggtattgctctagagcaaatcatttgggacagcagtaaatggtcagaactt
gatagttctcaagcttcattattggcttctcaattgaaaataaaacagagtcataatgaa
ctagctggacgattaattagtgcatatcttgatcttgcccagtctcaaggggagcttcgt
ttagcgcagcaaaagtttgatgaaggcagaaagatgttacgtatcgttgagctacgttac
aaggctgggaaaattagatctgttgatttggaggatatgcgttctaatcatcttgacgaa
gaagcaaatatattagcgaatcgattacaagttgaagacaagaaagttcgtttgattaag
ctaattagtatagaacccacccaagttaatgaaattaagaccaataacctatcacaacca
aaattgattgtgaacagtaagcaagagtggctgaaattagcaagtaattatagccctgat
ctattaatggcaaaacaaaatattcgaatttctgaattggaaacaggaaaggccaaaacg
ggttattaccctacgatcaccgcctcagtaggatacagcgataatactcgctcagataat
actcgttcagatagtggactgaatgcgagcttaaatttgagtttaccgcttgatttaaat
agttcaataggatccagtgttgagcgtgctaagttagaagttctccgtgctaaacaagat
gttcgagcggtagagattgaaataaaaagtactatttctaaccgttttaatcagctatct
ttgaattggcaacgagttgaaatggcagagaaacaagtcgcgtcgaaggagctagtttta
aaaagtaaacaagccatttataaagctggaatggcagaagcgtctgatattattgaggcg
cataatagtttgtttgttagtaaaagctctttacaatcattgctttatcaatattggagg
gatcgtatttccttacttaagtctgtcggtagattagatgatgaaactataaccttgatt
tcacaggcactgcaatcatga
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