Variibacter gotjawalensis: GJW-30_1_04480
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Entry
GJW-30_1_04480 CDS
T05320
Symbol
oprM
Name
(GenBank) outer membrane protein OprM precursor
KO
K18139
outer membrane protein, multidrug efflux system
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo01501
beta-Lactam resistance
vgo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GJW-30_1_04480 (oprM)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GJW-30_1_04480 (oprM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vgo02000
]
GJW-30_1_04480 (oprM)
01504 Antimicrobial resistance genes [BR:
vgo01504
]
GJW-30_1_04480 (oprM)
Transporters [BR:
vgo02000
]
Other transporters
Pores ion channels [TC:
1
]
GJW-30_1_04480 (oprM)
Antimicrobial resistance genes [BR:
vgo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GJW-30_1_04480 (oprM)
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
GJW-30_1_04480 (oprM)
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
GJW-30_1_04480 (oprM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Peroxin-13_N
Motif
Other DBs
NCBI-ProteinID:
BAT61918
UniProt:
A0A0S3Q186
LinkDB
All DBs
Position
4571700..4573169
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AA seq
489 aa
AA seq
DB search
MVKAVATARSIAARALLAPALALALGGCLLTPDRPAVNLEIPENYRNGPQRPAETAPAVA
QWWRGFGSKELNTLIEDANVYNIDIAIASAQIVQAEAQAGIAAAPLFPQLTGTANAQRSR
TPASSTTGAVTRSQYNVGLTASYMIDFWGKNRSALLAAEENADLARFNREVVTISTVSAV
VNSYFAILSAQDQLRVARNNLAAAERILSLIRRQFTAGTTSQLDVSQQEALVANQRASIP
PLEIIVRQNIATLAVLVARPPANISVAGGSMRQLAVPRIRPGLPSQLLYQRPDVRLAEAQ
LASSNYSVDSARAALFPQIQLTASTGYQSAALASLFVPGAWYYTLAAGLTQPIFDGFLLR
NQLAQARGVQMQYLETYRKAVLSSFADVDKALVAVQQYTLQERLQQAAVAASRRAFDVAE
TQLNGGTVNLITVLQTQLTLFQAENTLVQVRLQKLLATSSLFQALGGGWSPDNVFIDGLP
PQPRQGRVN
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaggctgtcgcgacagcaaggtcgatcgctgcgcgcgcgttgctcgcgccggcc
ctcgcgcttgcattgggaggctgcctgctgacgccggatcgcccagccgtcaacctcgaa
attcccgagaactaccgcaacggcccgcagcgcccggccgagacggctccggctgtcgct
cagtggtggcgcggcttcggctcgaaggagctcaacacgctcatcgaagacgcgaacgtt
tacaacatcgatatcgcgatcgcctccgcgcagatcgtgcaggccgaagcacaagccggt
atcgcagcggcgccgctgttcccgcaactcaccggcaccgcgaatgcgcagcgcagccgc
acgcctgcgtcgagcaccaccggcgcggtaacgcgcagccagtacaatgttggcctcacc
gcaagttacatgatcgacttttggggcaagaaccgttctgccctgctcgccgccgaagaa
aacgccgatcttgctcgcttcaaccgtgaggtcgtgacgatctcgacggtctccgctgtg
gtcaattcctactttgccatcctgagcgcgcaggatcagttgcgcgtcgctcgcaacaat
ctcgcggccgccgagcgcatcctctcgctgatccgccgccaatttactgccggcacgact
tcgcagctcgacgtctcgcagcaggaagcgcttgtcgccaaccagcgcgcctcgatcccg
ccgctcgaaatcatcgtccgtcaaaatattgcgacgctcgccgtgctggtcgcgcgtcca
cccgcaaacatcagtgttgcgggtggctcgatgcggcagctcgcagtgccgcgcattcgc
ccaggtctaccctcacaacttctctaccaacgtccggacgttcgtcttgccgaggcgcaa
ctcgcgtcatcgaactacagcgtcgactcggcacgcgccgcgctcttcccgcagattcaa
ttgaccgccagcaccggctatcagagcgccgcgctggcgtcgctgttcgtgcccggcgca
tggtactacacgctcgccgccggcctgacgcagccgatcttcgacggcttcctgctgcgc
aaccagctcgcgcaggcgcgcggcgttcagatgcagtatctcgagacgtatcgcaaagcc
gtgctgtcatctttcgcggatgtcgacaaagccctcgtcgctgtccagcaatacacgttg
caggagcgccttcagcaagccgccgtcgcggcgtcacgccgcgccttcgacgtcgctgag
acgcagctcaatggcggcaccgtcaacctgatcacagtgctgcaaacgcagctcacgtta
ttccaggccgagaacacgctggtgcaagtccgtctgcaaaaactcctcgcgaccagcagc
ttgtttcaagcgctcggcggcgggtggtcgccggacaacgtgtttatcgacggccttccg
ccgcagccccggcaaggccgcgtgaactag
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