Vibrio iocasae: SNR28_16540
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Entry
SNR28_16540 CDS
T11169
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
vic Vibrio iocasae
Pathway
vic01501
beta-Lactam resistance
vic02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SNR28_16540
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SNR28_16540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vic02000
]
SNR28_16540
01504 Antimicrobial resistance genes [BR:
vic01504
]
SNR28_16540
Transporters [BR:
vic02000
]
Other transporters
Pores ion channels [TC:
1
]
SNR28_16540
Antimicrobial resistance genes [BR:
vic01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SNR28_16540
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
SNR28_16540
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
SNR28_16540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
XHF86292
LinkDB
All DBs
Position
2:complement(1472720..1474093)
Genome browser
AA seq
457 aa
AA seq
DB search
MYNNKSRTKKVVVATMFLLLAGCSSLTAQQEFAAKTNEVTIPEQWQEKSEFVNGDFANQL
LQLVDKESVSKIVDDALTANYDLRTTAARLKQSRLLHQQAEINEDPSLNTSYEASRAKKG
AIANSQTLSLNLSWEIDVWGRLADASDAASATAKASELDYTYARNSLAARVIQAWLDINY
RAQIIAVEEQWVTSLVHTEEIIREQVLDGEKEQADLDTAKASTENVRATLAARKQSQLIA
IRNLNVLRGQSSDNLEDLALEPVTVSSPPVQVPGNVIGSRPDLIAAYQRILSADKKTSVA
YKELLPKFTLTASASRTGETMNQLLDSSSAWNLIGGITAPIFNRDSLKNSARISELDAEI
AYLDYQKLMLNALTEVENAFDQEASFKTQEYHLSRAYKHSFESMRNYQYLYQDGASGVLS
LLVAKQSAFQAKIKLLETEQARFSNRITLGLALGMGV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtataacaacaaaagcagaacgaagaaagtcgtcgttgcgactatgtttctgttactc
gcaggatgcagctctcttactgctcagcaagagtttgcagccaaaacgaacgaggtaacg
atacccgagcagtggcaagaaaaatcggagttcgtaaacggtgattttgctaatcagctc
ttacaactggttgacaaagaatcggtatcaaagattgttgatgatgctttaactgcaaac
tatgacttgagaacaaccgctgctcgtctaaagcagtcccgattgcttcaccagcaggca
gaaatcaatgaagatccttccttgaacacaagctatgaagcaagcagagcgaaaaaggga
gcaatagcaaactctcaaactctttccttaaacctaagctgggagatagatgtctggggc
agacttgcggatgcgtctgatgctgcgtctgcgactgcaaaagcaagcgaacttgattac
acgtatgccagaaactcccttgcagcccgtgtgattcaggcgtggctggacatcaactac
cgcgctcaaatcatcgctgttgaagagcagtgggtaaccagcttagtccataccgaggaa
attattcgtgaacaggtactcgatggtgaaaaagagcaggcagacttagatacagcaaaa
gcctctacagagaacgtacgagccacactggctgcaagaaagcagagtcaactcattgca
atacgaaacctcaacgttttgcgggggcagtcgagtgacaatctagaagatcttgctctg
gagcctgttactgtttcatccccaccggtgcaggtacccggaaatgtcattggctctcga
ccagatttaattgcggcctatcagcgaattctctccgccgataaaaagacctcggttgct
tacaaagagttgcttccgaaattcacgctcaccgcatcagcaagcagaacgggtgagaca
atgaaccaactgctggacagctcttctgcatggaatcttatcggtgggattaccgcgcct
attttcaatcgggactctctgaaaaacagtgcaagaatctcagagctggatgcggaaatt
gcgtatctcgattaccagaaactcatgctcaatgcactcacagaggttgaaaacgcattt
gatcaggaagcctcttttaagacgcaggagtatcacttaagcagagcttataagcactct
tttgaaagcatgcgtaactatcaatacctctaccaggatggtgccagcggcgtactgtct
ctactggtagcaaaacagtcggcctttcaggcaaaaatcaaactattagaaacagagcaa
gctcgcttttccaatcgaattacactcggccttgctctcggtatgggagtataa
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