Vibrio sp. dhg: DBX26_20285
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Entry
DBX26_20285 CDS
T11094
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
vid Vibrio sp. dhg
Pathway
vid01501
beta-Lactam resistance
vid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DBX26_20285
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DBX26_20285
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vid02000
]
DBX26_20285
01504 Antimicrobial resistance genes [BR:
vid01504
]
DBX26_20285
Transporters [BR:
vid02000
]
Other transporters
Pores ion channels [TC:
1
]
DBX26_20285
Antimicrobial resistance genes [BR:
vid01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DBX26_20285
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DBX26_20285
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DBX26_20285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
KIF21A
Motif
Other DBs
NCBI-ProteinID:
AXT73290
LinkDB
All DBs
Position
2:complement(1024174..1025562)
Genome browser
AA seq
462 aa
AA seq
DB search
MTNTTKFKTRFLAVALGAALLAGCGSMMRSDYQAPEVQVPTNWQQVHVAGGVSIDPWWLA
FNDPNLNSYINKVLQENNDLEVATLTLKKARLQLGLAKDDLFPTFSSSTSAQVEKWLDSG
ESGDSYSTNLTVGYELDLWGKVSADIDAAKWAAMASKEDREATAQSLVATTASLYWQIGY
LKQRLQLGQNNIDDAQQTLNLIQRQYELGAVDQLDVLEAKSSLASLQAQQSEFEQSLLEA
NNAFAILFNQPPQSMSDTIRMLPDESVPSLNVGVPADLLIRRPDVKAAIYDVKSALANKD
AADLDYLPELTLTGALGGSSEALKDLLSNPVGTLGADITLPFLQWNEMENNKAIADVEYK
TAIVNYRQVLYTAFQDVENALSAREKLMYQSDRLREQYDAASAAEKIYAARYQYGSTSIM
DYLDAQENTRNAEASLLENRYNQFITQVTLYQSLGGTDIAPL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatacaacaaaatttaaaactcgctttcttgccgttgcattaggcgcagccttg
cttgctgggtgtggctcaatgatgcgttctgattatcaggcacctgaagttcaggtgccg
acaaactggcagcaggtgcatgtcgctggtggtgtcagtatcgacccatggtggctggcg
tttaatgacccaaacctgaatagttacatcaataaagtacttcaggaaaataacgatctg
gaagtcgcgacgctgacactgaaaaaagcacgtttgcaattagggttagcgaaagatgac
ctgtttccgacattcagctcatcgacttctgctcaggtcgaaaagtggctagacagtggt
gaatcgggtgacagttacagcacgaatttaactgtcggttacgagttggatttgtggggt
aaggtctctgctgatatcgatgcagcaaaatgggcggcaatggcgagcaaagaagatcgc
gaagccacagctcaaagtttggtggcgaccaccgcttcactttactggcaaattggttat
cttaagcagcgattgcaacttggccaaaataacattgatgatgcacagcaaaccctgaat
ctgattcaaaggcagtatgagctgggtgcggttgatcagcttgatgtgctggaagcgaaa
agttcactggcaagtttgcaagcgcagcagagtgagttcgaacagagcttgttagaggcg
aataacgcctttgccatcttgttcaatcagcctcctcagagtatgagtgacactattcgc
atgttaccggatgaaagcgttccgtcgctcaatgtaggtgttcctgccgatctgttgatt
cgtcggcctgatgtcaaagctgcgatttatgacgtgaaatctgctctggcaaacaaagac
gccgctgatctggattacctacctgagctgacgttaacgggagcgctaggtggttcttca
gaggcattaaaagacttgctttctaaccccgtaggcacgttaggcgcagacatcacattg
ccatttctgcaatggaacgaaatggagaacaataaagcgattgcggacgtcgagtacaaa
acggctatcgtcaattaccgccaagtgttgtacaccgcattccaggatgtggagaacgca
ctgtcagcacgcgaaaagttgatgtatcaatctgatcgtttgcgagagcaatatgatgcg
gccagtgccgctgagaagatttatgctgcgcgataccagtatggctctacttcgatcatg
gactatttagatgctcaggaaaacaccagaaacgcagaagcgtctttgcttgagaatcga
tacaatcaattcattactcaggtaacgctatatcaatcattaggtggtacggacatagcg
ccgttgtaa
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