Viridibacillus arvi: JNUCC6_15865
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Entry
JNUCC6_15865 CDS
T06874
Name
(GenBank) HAMP domain-containing protein
KO
K18345
two-component system, OmpR family, sensor histidine kinase VanS [EC:
2.7.13.3
]
Organism
vij
Viridibacillus arvi
Pathway
vij01502
Vancomycin resistance
vij02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JNUCC6_15865
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
JNUCC6_15865
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vij01001
]
JNUCC6_15865
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vij02022
]
JNUCC6_15865
01504 Antimicrobial resistance genes [BR:
vij01504
]
JNUCC6_15865
Enzymes [BR:
vij01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
JNUCC6_15865
Protein kinases [BR:
vij01001
]
Histidine kinases
OmpR family
JNUCC6_15865
Two-component system [BR:
vij02022
]
OmpR family
VanS-VanR (VanB type vancomycin resistance)
JNUCC6_15865
Antimicrobial resistance genes [BR:
vij01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
JNUCC6_15865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c
HisKA
HAMP
CovS-like_HAMP
HATPase_c_2
HATPase_c_5
DUF7036
DUF4199
Motif
Other DBs
NCBI-ProteinID:
QOV10059
LinkDB
All DBs
Position
complement(3195454..3196911)
Genome browser
AA seq
485 aa
AA seq
DB search
MNKILKITKMNRITYKLFWITSLILLAFALVMYLTLYFFLPTFYEQYKTDQLQTGIEEII
DKSKDLTFQNAIPLLDKYAQKNNAIIYLQDQEGRIIYSPTFSFTGINSKGVAVTPATTKG
PLENSDNVSNSYNATIPIQFLNVNLTLVVFATFQPINEASQVLALFLPYISIIVIVIGLG
SAYLYSRFITKPLIYINQGAQKMANLDFSEKIEVRSNDELAELSNSLNDMSVNLQHTMHD
LKKANEQLKSDIEKERKIEQKRREFFSIVAHELKTPLTVMKGYLEGMIYNIGPYQNRDQY
LKKNHQIIESMEQLVREILSMSKLEQHTFKLQLEEVNLSELINTITKDLEFFASQKDIQM
IKQIGSHHLVYTDRVLLEKACKNIIHNAIMYSPHGEKVYITLTADSKQHIQIKVINTGIK
IKEEDLQQIFEPFYRIEKSRNRNTGGSGLGLYIVKQVFETLSITYSLNNTEHGVQFLVTI
PLSTK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatattaaaaatcacaaagatgaatcgaattacttataaactcttttggatt
acttcacttattttgttagcctttgcattagtcatgtatctaactttatacttctttcta
cctacattttatgaacagtataaaacagatcaacttcaaacaggaatagaagaaataatt
gataaatccaaggatcttacttttcaaaatgcaataccgcttcttgataaatatgcacaa
aaaaataacgcaataatctaccttcaagatcaagaaggaagaattatttattctcctaca
ttttcctttaccggtattaatagtaaaggtgtagcagtaacgccagctactactaaaggt
ccattggagaattcagataacgtttccaattcgtataatgctaccatacctattcaattc
ctaaacgttaacttaacacttgtggtgttcgcaacatttcaacctattaatgaagcttca
caggtattggcccttttccttccttatattagtattattgtgattgttattggtttaggt
agtgcttatttatattcacgattcatcacaaaacctctcatttatattaatcaaggagca
caaaagatggcgaacttggatttctctgaaaaaatcgaggttcgatccaatgatgagcta
gcggaattatccaatagcttaaatgatatgtcagttaatttacaacatactatgcatgat
ttaaagaaagcaaatgaacagttaaaaagcgatattgaaaaagaaagaaaaatagaacaa
aaacgcagggaatttttctcaatagtagcacatgaattaaaaactcctctcaccgtcatg
aaaggatacttagaaggaatgatttataatattggcccgtatcaaaatcgtgaccaatac
ttaaagaagaatcaccaaattatcgaaagtatggaacaacttgttcgcgagattttaagc
atgtcaaaattagagcaacatacttttaaactacaattggaagaagtaaatctttcggaa
ttaattaatacaatcacaaaagatcttgaattttttgcttctcaaaaagacattcaaatg
ataaaacaaattggttctcaccatcttgtttatacagaccgggttcttttagaaaaagcc
tgcaaaaatattattcataatgcaattatgtattcacctcatggagagaaagtatatata
actttaactgcggactcaaaacagcacattcaaattaaagtcattaatacaggtattaaa
attaaagaagaggatttacagcaaattttcgaaccgttttatagaatcgaaaaatcacga
aatcgaaatactggtggaagtggcttagggttatatattgtaaaacaagtttttgaaacc
ctctctattacctattctttaaataacactgaacatggcgtacaatttttagttaccatt
cctttatccacaaagtga
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