Vibrio neocaledonicus: D3H41_01970
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Entry
D3H41_01970 CDS
T06228
Symbol
tolC
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl01501
beta-Lactam resistance
vnl01503
Cationic antimicrobial peptide (CAMP) resistance
vnl02020
Two-component system
vnl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
D3H41_01970 (tolC)
09132 Signal transduction
02020 Two-component system
D3H41_01970 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D3H41_01970 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
D3H41_01970 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_01970 (tolC)
02044 Secretion system [BR:
vnl02044
]
D3H41_01970 (tolC)
01504 Antimicrobial resistance genes [BR:
vnl01504
]
D3H41_01970 (tolC)
Transporters [BR:
vnl02000
]
Other transporters
Pores ion channels [TC:
1
]
D3H41_01970 (tolC)
Secretion system [BR:
vnl02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
D3H41_01970 (tolC)
RTX toxin transporter
D3H41_01970 (tolC)
Multiple protein transporter
D3H41_01970 (tolC)
RaxAB-RaxC type I secretion system protein
D3H41_01970 (tolC)
Antimicrobial resistance genes [BR:
vnl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
D3H41_01970 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
D3H41_01970 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
LntA_helical
MnmE_helical
Motif
Other DBs
NCBI-ProteinID:
QCO84943
LinkDB
All DBs
Position
1:complement(399796..401124)
Genome browser
AA seq
442 aa
AA seq
DB search
MKKLLPLFISAALGSMSTSAFADSLAEIYDLAKQNDPQLLSVAAQRDQAFEAITSSRSAL
LPQINLTAGYNLTRGDTEYDSNLISDVSNDGNALTAGVSFSQALYNRASWISLDTAEKSA
RQADATYAATQQALILRVSQAYFEVLRAQDNLVFVRAEKAAVGRQLEQTKQRFEVGLSAI
TDVHDAQAQYDQVLADEVLAENALTNSYESLREITGQEHKDLNILDTGRFTASPSTVPAE
SLIDEAKTKNLTLLSSRILQDIARDNISLASSGHLPTLSLDGGYNYGDTSHSSRDNTTDN
FNIGVNLAVPLYTGGNVTSQTKQAEYAYVAASEDLEAQYRSVVKDVRAQNNNINASIGAL
RAYEQAVISARSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNARYDYILSVLQLR
QAVGTLSEQDILDVDAGLKAAK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattgcttccactatttatcagtgcagcgctaggtagcatgagtacgtctgcg
ttcgcagactctttggctgaaatctacgacttggcaaaacaaaatgatccacaattgctc
agtgtagcagcacaacgtgaccaagctttcgaagcaatcacctcaagccgtagtgctcta
ttaccacaaattaaccttactgcgggttacaatttaactcgtggtgatactgaatacgat
tcaaatctaattagcgacgtatcaaacgatggcaacgcactaaccgctggcgttagcttt
tcacaagcactttacaaccgcgcatcttggatctctctagatactgctgagaaaagtgct
cgccaagcagacgcaacttacgcagcgacgcaacaggcactgattcttcgcgtgtcacaa
gcgtattttgaagttctacgcgcacaagataatcttgttttcgtacgtgcagaaaaagcc
gcggttggccgtcaacttgagcaaactaaacagcgttttgaagtaggtttgtctgcaatc
actgacgtgcatgacgcacaagctcagtacgaccaagtgctagcggacgaagtgttggca
gaaaacgcgctaactaatagctacgagtcactgcgtgaaattacaggccaagagcacaaa
gacctcaacattttggacactggccgcttcactgctagcccatcgaccgtaccagctgaa
tcgctcattgatgaagcaaaaaccaaaaacctgaccttgctatcttcacgtattcttcaa
gacattgcgcgtgacaatatttcactagcaagctctggccacctaccaacgctctctcta
gacggtggttacaactacggtgatacttctcatagctctcgtgacaacacgacagacaac
ttcaatattggtgtgaaccttgctgtaccgctatacacaggtggtaacgtaacctctcaa
accaaacaagctgaatacgcgtacgtggcagcaagcgaagatcttgaagcacagtaccgt
agcgtagtcaaagatgttcgcgcacaaaacaacaacattaacgcctctatcggcgcatta
cgtgcgtatgagcaagcggttatttctgcacgctctgcactagaagcaacagaagctggc
tttgatgtaggtactcgtactatcgttgatgtactggacgcgactcgtcgtctatacgat
gcgaacaaaaacctatcgaacgctcgttacgactacattttaagtgttcttcagctacgc
caagccgttggtacgctaagcgaacaagacatcttggatgttgatgcaggtttgaaagcg
gcaaaataa
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