Vibrio neocaledonicus: D3H41_08980
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Entry
D3H41_08980 CDS
T06228
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl01501
beta-Lactam resistance
vnl01503
Cationic antimicrobial peptide (CAMP) resistance
vnl02020
Two-component system
vnl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
D3H41_08980
09132 Signal transduction
02020 Two-component system
D3H41_08980
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D3H41_08980
01503 Cationic antimicrobial peptide (CAMP) resistance
D3H41_08980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_08980
02044 Secretion system [BR:
vnl02044
]
D3H41_08980
01504 Antimicrobial resistance genes [BR:
vnl01504
]
D3H41_08980
Transporters [BR:
vnl02000
]
Other transporters
Pores ion channels [TC:
1
]
D3H41_08980
Secretion system [BR:
vnl02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
D3H41_08980
RTX toxin transporter
D3H41_08980
Multiple protein transporter
D3H41_08980
RaxAB-RaxC type I secretion system protein
D3H41_08980
Antimicrobial resistance genes [BR:
vnl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
D3H41_08980
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
D3H41_08980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QCO86227
LinkDB
All DBs
Position
1:1893709..1895124
Genome browser
AA seq
471 aa
AA seq
DB search
MKKTGKFWILGLLSSSISLACHAAPITFDTAWQLLLENNYSLKAQRSNVENYQYQESATS
NLNLPQVTIGANYTRLDTDITLSGKQILDSTGAHINVPPAFQPIFGALANTTSTITERDI
FSSSIRAIWPIFTGGRISAAQSAAEGKTDEAKSQLLMEQQARFEDLSKYYFSVVLAKEVL
ATRQAVEAGLKKHRDFAIKLEEQGQIAHVERLQAEASLDKASVETRKAASDLSIAQAALG
KLLAQDDAVEPAESLFINDSLPPLTAFVDQTLLTYPGLELLSAKHKQASSLIKAEKGKYY
PEVYLYGDYSLYEDDSLASQMKPDWLVGVGVSIPLIESSGRSEKVKAAQSVVSQVDSLKS
QAKQDLSLLVQKTYLEAQQAIDEVQGLASSIELANENLRLREKAFTQGLSSSLDVVDAQL
YVASIETQRSAARFRYLISLTKLLALSSEMNSFEQYQNTAYIPASTSKEVK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacaggaaagttttggatactgggcttacttagcagctcgatttcccttgcc
tgtcatgcggcaccgatcacttttgataccgcatggcagctattgctagaaaacaactat
tctcttaaagctcaacgctcaaacgtcgagaactaccaataccaagagagtgcaaccagc
aatctcaacttacctcaagttaccattggcgcgaattacacgcgtttagataccgatatc
acgctttcgggaaaacagattctagacagcacaggagcacacattaacgtacctcctgct
tttcagcctatttttggtgccttagctaataccacttcgaccataaccgagcgcgatatt
ttctcttcgtctattcgtgccatttggccaatttttactggtggtagaatttctgcggct
caatcagcagcagaaggcaaaacggatgaggcgaaaagtcagcttttaatggaacaacaa
gcgcgttttgaagatttatcgaagtactacttttctgtcgtactggcaaaggaagtactc
gcaacgcggcaagcagttgaagctgggctaaaaaagcatcgagattttgccattaagctt
gaagagcaaggacaaatcgcgcacgttgagcgcctgcaagccgaggcttctttagataaa
gcatctgtagaaacacgtaaagcagccagcgatttgagtatcgctcaggctgcattaggt
aaattactcgcgcaagatgatgccgtagagcccgctgaatctttgtttatcaacgacagt
cttccccctcttactgcttttgtcgatcaaacgttgcttacctatccggggttagagctt
ctgagcgctaaacacaaacaagcctctagcttaatcaaagcagaaaaagggaaatactac
cctgaagtttatctttacggcgactacagcttgtatgaagacgattctctcgcaagccaa
atgaagcctgactggttagttggtgttggtgtcagcattccactgattgaatcatcaggg
cgaagcgaaaaagtcaaagccgctcaaagcgtcgtctcgcaggtcgactcattaaagtcc
caagccaaacaagacttatcgctgttagtccaaaagacatacttggaggctcagcaagcc
attgatgaagtacaagggctcgcatctagcattgaactcgctaacgaaaacctgcgcttg
cgtgaaaaagcatttactcagggtctgtcgtcttctctggatgttgtggatgcacaactt
tatgtcgcgagtatagaaacacaacgttcagcggcgcgtttccgctatttaatatcttta
accaagctactcgcattgagcagtgaaatgaacagcttcgaacaatatcaaaataccgct
tatatccctgcttcaacatccaaagaggtgaaataa
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