Vibrio neocaledonicus: D3H41_11055
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Entry
D3H41_11055 CDS
T06228
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl01501
beta-Lactam resistance
vnl01503
Cationic antimicrobial peptide (CAMP) resistance
vnl02020
Two-component system
vnl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
D3H41_11055
09132 Signal transduction
02020 Two-component system
D3H41_11055
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D3H41_11055
01503 Cationic antimicrobial peptide (CAMP) resistance
D3H41_11055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_11055
02044 Secretion system [BR:
vnl02044
]
D3H41_11055
01504 Antimicrobial resistance genes [BR:
vnl01504
]
D3H41_11055
Transporters [BR:
vnl02000
]
Other transporters
Pores ion channels [TC:
1
]
D3H41_11055
Secretion system [BR:
vnl02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
D3H41_11055
RTX toxin transporter
D3H41_11055
Multiple protein transporter
D3H41_11055
RaxAB-RaxC type I secretion system protein
D3H41_11055
Antimicrobial resistance genes [BR:
vnl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
D3H41_11055
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
D3H41_11055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
RNA_pol_Rpb4
Motif
Other DBs
NCBI-ProteinID:
QCO86575
LinkDB
All DBs
Position
1:complement(2214390..2215661)
Genome browser
AA seq
423 aa
AA seq
DB search
MVKLQRSTIAFALLAATLSLPTYAISIEQAWQQAKQNDPNYEKAKIGVQLGEVGVQSSRS
ALLPGLSASASADWNESSSHSNSYGATLSQTIWDSSLWSELDQANANYLKVQLELSQAHN
ELAQKLLTAYLDVASALGDLKLAQSKLEEGKELLNIIEKRYRAGKVKSVDVEEMRANQVS
EQASILNAKADLEVKKAELAALINQMPESVDQIRTDSLIQPPMLVDSQEQWLKLAKDSSP
ELLVAAQMVKASEFAKDSAKGGYYPTVKGSVGYSDGDNRSNGEFNAGISLSLPIDLNGAV
RAKVDEASLNILSAKQDMRRVEIDIQKRVIQQFTQVDINWNQVLIANELVESRARVLQSK
EKLYDAGLLEVSEVISAHNSLFEAKNSLQTNLYSYWRKRIGLLQTAGKLDDDTMALISRA
FHS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggttaagctgcaacgatcaacaatcgcctttgcattgttggctgccacgctcagtttg
ccgacctacgcaatttctattgaacaagcttggcaacaagcaaagcagaacgatccaaat
tacgaaaaagcgaaaatcggcgtccagcttggcgaggttggcgtacagagtagccgcagt
gcgttattgccgggtttaagtgccagtgcgtcagcggattggaatgagtcctcaagccat
tccaacagttacggcgctaccttatctcaaactatttgggatagcagtttgtggtcggaa
ctggatcaagcgaatgccaattatctcaaagtacagttagagttatctcaagcgcataac
gagcttgcgcaaaagttgctcaccgcttacctagatgtggcaagcgcactgggcgacctc
aaattggcgcagtccaagctggaggaggggaaagaacttctcaacatcatcgagaaacgc
tatcgagcaggcaaagtgaagtcggttgatgttgaagagatgcgagcgaatcaagtctct
gagcaagcaagtatcctcaatgcgaaagccgatctcgaagtgaaaaaagcagagcttgcg
gcgttaatcaatcaaatgccggagagtgtcgaccaaattcgaacggattctttgattcag
ccgccgatgctggtggactctcaggagcaatggctaaaactggcgaaagacagcagtcca
gagctgttggtggcggcgcagatggtgaaagcgagcgagttcgcgaaagattcagctaaa
ggtggatactacccgaccgtcaaaggcagtgtgggctacagcgatggtgacaatcgttca
aacggcgagtttaacgctgggattagtttgagtttgccgattgacctcaatggtgcagtg
cgagcgaaagtggacgaagcatcgttgaacattttaagcgccaagcaagatatgcgtaga
gtggaaattgatattcagaaacgagttattcagcagtttactcaggtcgatatcaactgg
aatcaagttttgatagcgaacgagctggttgagtcgcgcgccagagtgttgcaaagcaaa
gagaaactttacgacgctggtctgcttgaagtgtcggaagttatcagtgcacacaacagc
ttgtttgaggcgaaaaacagtctgcaaaccaacttgtacagctactggcgtaagagaatc
ggcttactgcaaaccgcagggaaactcgatgacgataccatggcgttgatctctcgagct
tttcattcatga
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