Vibrio parahaemolyticus RIMD 2210633: VP0197
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Entry
VP0197 CDS
T00120
Name
(GenBank) putative capsular polysaccharide biosynthesis protein D
KO
K24336
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.115
4.2.1.135
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00541
Biosynthesis of various nucleotide sugars
vpa01100
Metabolic pathways
vpa01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VP0197
Enzymes [BR:
vpa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
VP0197
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
VP0197
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GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
3Beta_HSD
adh_short
GDP_Man_Dehyd
DXP_reductoisom
Sacchrp_dh_NADP
Shikimate_DH
TrkA_N
DUF2459
Methyltransf_25
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
BAC58460
UniProt:
Q87T73
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All DBs
Position
1:207250..208440
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AA seq
396 aa
AA seq
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MNTILSLIGRTDALFTQDIAHHEAELFRIVSESRFLVLGGAGSIGQAVTKEIFKRNPKKL
HVVDISENNMVELVRDIRSSFGYIDGDFQTFALDIGSLEYDAFIKADGKFDYVLNLSALK
HVRSEKDPYTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVSTDKAANPVNMMGASKRIME
MFLMRKSEQIAISTARFANVAFSDGSLLHGFNQRIQKRQPIVAPNDIKRYFVTPQESGEL
CLMSCIFGENRDIFFPKLSEALHLISFADIAVKYLEQLGYEPHLCDSEEEARQLAHMLPE
QGKWPCLFTASDTTGEKDFEEFFTDKEELDMSRFENLGIIKNEPLYEQELLTLFENSISE
MKGEQAWSKEEIVKLFFTMIPDFGHKETGKYLDSKM
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaatactatattatctcttattggtcgtactgacgccctgtttacacaagatatcgct
caccatgaagctgagttatttcgtattgtttctgaatctcgtttccttgttcttggtggc
gcaggctcgattggtcaagctgtaactaaagaaatcttcaaacgcaatcctaagaaatta
catgttgttgatattagtgaaaacaacatggttgagttagttcgagatatccgtagctca
tttggttacattgatggtgatttccagacatttgctttggatattggctctctagaatac
gatgcattcattaaagcagacggtaagtttgactatgtattgaacttatctgcgcttaag
catgttagaagcgagaaagacccttatacattgatgcgcatgatcgatgtaaatgtattt
aacacagataaaaccattcagcagtctattgatgctggagccaaaaagtacttctgtgtt
tcgactgataaagcagcaaacccagtcaacatgatgggagcatcaaagcgtattatggag
atgttcctaatgcgtaaaagtgagcaaatagcaatctcaactgcgcgttttgcaaatgta
gcattctctgatggttcgctgttacacggctttaaccagcgcattcaaaagcgtcagcct
atcgtggcgccaaatgacattaaacgctactttgttaccccacaagagtcaggtgaacta
tgtttaatgtcttgtatctttggtgaaaaccgtgacattttctttccaaaattgagtgaa
gctctacaccttatttcgtttgcagatattgcagtgaaatacttagaacaacttggctat
gagcctcacttgtgtgattcggaagaagaggctcgtcagcttgctcatatgcttccagaa
cagggtaaatggccatgtttgttcacagcgagtgataccactggtgagaaagatttcgaa
gagttctttacagacaaggaagagttggatatgtctcgatttgaaaatctgggcatcatc
aaaaatgagcctctttatgagcaagagctcctaactttgtttgaaaatagtatttctgag
atgaaaggtgagcaagcttggtctaaagaagaaattgtgaaactgtttttcacgatgatt
cctgattttgggcacaaagaaacgggtaaatacctcgatagtaagatgtaa
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