Vibrio parahaemolyticus RIMD 2210633: VP0425
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Entry
VP0425 CDS
T00120
Name
(GenBank) outer membrane protein TolC
KO
K12340
outer membrane protein
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa01501
beta-Lactam resistance
vpa01503
Cationic antimicrobial peptide (CAMP) resistance
vpa02020
Two-component system
vpa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VP0425
09132 Signal transduction
02020 Two-component system
VP0425
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VP0425
01503 Cationic antimicrobial peptide (CAMP) resistance
VP0425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpa02000
]
VP0425
02044 Secretion system [BR:
vpa02044
]
VP0425
01504 Antimicrobial resistance genes [BR:
vpa01504
]
VP0425
Transporters [BR:
vpa02000
]
Other transporters
Pores ion channels [TC:
1
]
VP0425
Secretion system [BR:
vpa02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
VP0425
RTX toxin transporter
VP0425
Multiple protein transporter
VP0425
RaxAB-RaxC type I secretion system protein
VP0425
Antimicrobial resistance genes [BR:
vpa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
VP0425
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
VP0425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
LntA_helical
Reovirus_cap
Motif
Other DBs
NCBI-ProteinID:
BAC58688
UniProt:
Q87SJ8
LinkDB
All DBs
Position
1:complement(428576..429904)
Genome browser
AA seq
442 aa
AA seq
DB search
MKKLLPLFISAALGGISSSAWADSLAEIYDLAKQNDPQLLSVAAQRDRAFEAITSSRSAL
LPQINLTAGYNLTRGDTEYDSNLISDVSNDSNALTAGVNFSQELYNRASWITLDTAEKSA
RQADATYAAAQQGLILRVSQAYFEVLRAQDNLVFVRAEKAAVGRQLEQTKQRFEVGLSAI
TDVHDAQAQYDAVLADEVLAENDLINSYESLREITGQEHKNLNVLDTNRFSATRTNSPAE
TLIDEAKTKNLSLLSARISQDIARDNISLASSGHLPTLSLDGGYNYGDTSNSARDNTTDN
FNIGVNLAVPLYTGGNVTSQTKQAEFAYVAASEDLEAQYRSVVKDVRAQNNNINASIGAL
KAYEQSVVSARSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSDARYNYILSVLQLR
QAVGTLSEQDILDVDAGLKPAK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattgcttccactatttatcagtgcagcgctaggtggcataagttcttctgca
tgggctgattctttagctgaaatctacgacttagcaaagcaaaatgatccacaattgctc
agtgtagcagcacagcgtgaccgagcttttgaagcaatcacctctagccgtagtgctcta
ttaccacaaatcaacctaacagcgggttacaacctgactcgtggcgatacagaatacgat
tcaaatcttattagtgacgtgtcaaacgactcaaatgccctaactgctggcgttaacttc
tcgcaagaactttacaaccgcgcatcttggatcacattagatactgctgaaaaaagcgct
cgccaagcagatgctacttacgcagcagcacaacaaggtttgatccttcgcgtatctcaa
gcgtacttcgaagtattgcgcgctcaagacaatctagtcttcgttcgtgcagagaaagca
gccgttggtcgccaactagagcaaacaaaacaacgcttcgaagttggtttgtcggcaatc
actgacgttcacgatgctcaagctcagtacgatgcagtactagcggatgaagtgttggca
gaaaatgacctgatcaacagctacgaatcgctacgtgaaatcactggtcaagaacacaaa
aacttaaacgttcttgatactaaccgtttctctgcaacacgtacgaacagccctgctgaa
acgttgatcgatgaagcgaaaacgaagaaccttagcctattgtcagctcgtatttcacaa
gacatcgcgcgcgacaacatctcgctagctagctctggtcacctaccaacactgtctcta
gatggtggttacaactacggtgatacttcaaacagtgctcgtgataacacgacggataac
ttcaatattggcgttaacctagcagtgccactttacactggtggcaacgtgacatcacaa
accaaacaagctgagtttgcgtacgttgcagcaagcgaagatcttgaagctcagtaccgt
agcgtagtgaaagatgttcgtgcacaaaacaacaacatcaacgcttctattggtgcgtta
aaagcgtatgagcaatctgtagtttcagcgagatctgcgctagaagcgacagaagctggt
tttgatgtaggtactcgtactatcgttgacgttctagacgcaactcgtcgcctatacgat
gcgaacaaaaacctttcagatgctcgttacaactacatcctgagcgttcttcagcttcgc
caagcggttggtacactaagcgaacaagacatcttggatgtggatgcaggtttgaaacca
gcgaaataa
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