Variovorax paradoxus B4: VAPA_1c33530
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Entry
VAPA_1c33530 CDS
T02835
Symbol
prpC
Name
(GenBank) 2-methylcitrate synthase PrpC
KO
K01659
2-methylcitrate synthase [EC:
2.3.3.5
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00020
Citrate cycle (TCA cycle)
vpd00630
Glyoxylate and dicarboxylate metabolism
vpd00640
Propanoate metabolism
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01120
Microbial metabolism in diverse environments
vpd01200
Carbon metabolism
vpd01210
2-Oxocarboxylic acid metabolism
vpd01230
Biosynthesis of amino acids
Module
vpd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpd_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
vpd_M00012
Glyoxylate cycle
vpd_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VAPA_1c33530 (prpC)
00630 Glyoxylate and dicarboxylate metabolism
VAPA_1c33530 (prpC)
00640 Propanoate metabolism
VAPA_1c33530 (prpC)
Enzymes [BR:
vpd01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.5 2-methylcitrate synthase
VAPA_1c33530 (prpC)
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
DUF6415
Motif
Other DBs
NCBI-ProteinID:
AGU50439
UniProt:
T1XDM6
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All DBs
Position
1:complement(3541514..3542680)
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AA seq
388 aa
AA seq
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MTLTIENAPAAGFKPKKSVALSGVTAGNTALCTVGRTGNDLHYRGYDILDIADVCEFEEI
AHLLVHGKLPSACELRAYKSRLRAMRGLPASVKEALERLPASAHPMDVMRTGVSALGCVL
PEKDDHSLPGARDIADRLMASLGSMLLYWYHWSTQGRRIEVETDDDSIGAHFLHLLHGRA
PSASWERAMHTSLNLYAEHEFNASTFTARVVAGTGSDVYSAITGAIGALRGPKHGGANEV
AFEIQKRYDTPDEAEADIRRRVEAKEVVIGFGHPVYTVSDPRNAVIKRVAKQLSDEAGSS
RMYDIAERIEAVMWNAKKMFPNLDWFSAVSYHMLGVPTAMFTPLFVIARTSGWAAHIIEQ
RQDNKIIRPSANYTGPEDLVFVPISDRR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgacactgaccatagagaacgcgcccgccgccggcttcaagccgaagaaatccgtcgcg
ctttcgggcgtgaccgcgggcaacaccgcgctgtgcactgtggggcgcaccggcaacgat
ctgcattaccgcggctacgacatcctcgacattgccgatgtctgcgagttcgaggaaatc
gcgcatctgctggtgcatggcaagctgcccagtgcttgcgagctgcgcgcctacaagagc
cgcctcagggccatgcgcggcctgcccgcgagcgtgaaggaggcgctggagcgcctgccc
gccagcgcccatccgatggacgtgatgcgcacgggcgtctctgcgctcggctgcgtgctg
cccgagaaggacgaccattcgctgcccggcgcgcgcgacatcgccgaccggctgatggca
tcgctcggctcgatgctgctctactggtaccactggtccacgcaggggcggcgcatcgag
gtcgagaccgatgacgactcgatcggcgcgcacttcctgcacctgctgcatggccgcgcg
ccatcggcgagctgggagcgcgcgatgcacacctcgctcaatctctatgcggagcacgag
ttcaacgcctcgaccttcaccgcgcgcgtggtggctggcacgggctccgacgtgtactcg
gccatcaccggtgccatcggcgcgctgcgcgggcccaagcacggcggcgccaacgaggtg
gccttcgagatccagaagcgctacgacacgcccgatgaagccgaggccgacatccgccgc
cgcgtggaagccaaggaagtcgtcatcggcttcggccacccggtctataccgtgtcggac
ccgcgcaatgcggtcatcaagcgggtcgcgaagcaactctccgacgaggccggctccagc
cgcatgtacgacattgccgagcggatcgaagccgtgatgtggaacgcgaagaagatgttc
ccgaacctcgactggttcagtgccgtgagctaccacatgctcggcgtgcccacggccatg
tttacgccgctcttcgtgatcgcgcgcaccagcggctgggccgcgcacatcatcgagcag
cggcaggacaacaagatcatccgacccagcgccaactacaccggcccggaagacctcgtc
ttcgtgccgatctcggaccgccgctga
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