Variovorax paradoxus EPS: Varpa_3723
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Entry
Varpa_3723 CDS
T01392
Name
(GenBank) Vinylacetyl-CoA Delta-isomerase
KO
K14534
4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:
4.2.1.120
5.3.3.3
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00650
Butanoate metabolism
vpe00720
Other carbon fixation pathways
vpe01100
Metabolic pathways
vpe01120
Microbial metabolism in diverse environments
vpe01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Varpa_3723
09102 Energy metabolism
00720 Other carbon fixation pathways
Varpa_3723
Enzymes [BR:
vpe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.120 4-hydroxybutanoyl-CoA dehydratase
Varpa_3723
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.3 vinylacetyl-CoA Delta-isomerase
Varpa_3723
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Gene cluster
GFIT
Motif
Pfam:
HpaB_N
HpaB
Acyl-CoA_dh_M
Motif
Other DBs
NCBI-ProteinID:
ADU37907
UniProt:
E6V0W1
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Position
4015284..4016903
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AA seq
539 aa
AA seq
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MNAPLPASLMSGADYRESLRRYSPNVFVDGRRVDSVADEAAFQPGINAIALTYDYALKTQ
YEPLMTAVQHTSGKRVNRLSHINTSSGDLLNKLEAVRLVCQETGCAQRYLTHDALNAIAQ
VSARIDDARGSTEHTARFHEYLHRVQDQDLTLGVAMTDAKGDRSRRPHEQANIDSYLHVV
ERNARGIVISGTKAIVTGAPYVHELLVMPCRNMGREDADFAVCCAVPLDAPGLTIVARPA
GRPGEKLEHGDALFSRKYGQSTGVCMFDKVFVPWERVFYAGEWEHSGHLTYSYATHHRHS
CIGARAGFGDLLIGAGALMCEANGFDPGKESHLREQMVELITITESFFACGVAASVYGKA
DEHCEVFMPDPVFSNIGKLLLATKIYDMHRIAHYVSGGLIVTLPGPDEDHNPETAARLSD
VLRANPAIPYEQRIETARFIEDLTAGYQGGWYSVISLHGGGSPAAMKQEIWRNYPVGSKV
ELVERILERGIAADGSPAAAPHDPARAITRNRQPGKCCDTGCTTPGQPVMVELPVSLRI
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccccgctccccgccagcctcatgtccggcgccgactaccgcgaatcgctgcgc
cgctacagccccaacgtgtttgtcgatggccgccgcgtcgacagcgtggccgacgaagcc
gccttccagcccggcatcaatgccatcgccctcacctacgactacgcgctgaagacccag
tacgagcccctgatgaccgccgtgcagcacaccagcggcaagcgggtgaaccggctctcg
catatcaacaccagctcgggcgacctgctcaacaagctggaggccgtgcggctggtctgc
caggaaaccggctgcgcccagcgctacctgacgcacgacgcgctcaacgccatcgcccag
gtgtcggcgcgcatcgacgacgcgcgcggcagcaccgagcacaccgcgcgctttcacgag
tacctgcaccgcgtgcaggaccaagacctgaccctgggcgtcgccatgaccgatgcgaag
ggcgaccgcagccgccggccgcacgagcaggcgaacatcgacagctacctgcacgtggtc
gagcgcaatgcgcgcggcatcgtgatttcgggcaccaaggccatcgtgaccggcgcgcct
tatgtgcacgaactgctcgtcatgccctgccggaacatgggccgcgaagatgccgacttc
gccgtgtgctgcgccgtgccgctcgacgcacccggcctcaccatcgtcgcgcgaccggca
ggccgccctggcgaaaagctcgagcatggcgatgccctcttcagccgcaagtacggccag
agcaccggcgtgtgcatgttcgacaaggtcttcgtgccctgggagcgcgtcttctacgcc
ggcgaatgggagcattccggccacctcacctacagctacgccacgcaccatcgccacagc
tgcatcggtgcccgcgccgggttcggcgacctgctgatcggtgccggtgctctgatgtgc
gaggccaacggcttcgaccccggaaaggaaagccacctgcgcgagcagatggtcgaactc
atcaccatcaccgagagcttcttcgcctgcggcgtggcggccagcgtctacggcaaggcc
gacgaacactgcgaggttttcatgcccgacccggtgttcagcaacatcggcaagctgctg
ctggcgacaaagatctacgacatgcaccgcattgcgcactacgtgagcggcggcctgatc
gtcaccctgcccggccccgacgaagaccacaaccccgaaaccgccgcgcgtctttcggac
gtgctgcgcgccaacccggcgattccctacgagcagcgcatcgaaacggcccgcttcatc
gaagacctcaccgccggctaccagggcggctggtacagcgtgatcagtctgcatggcggc
ggctcgccggcggcgatgaagcaggagatctggcgcaactacccggtcggctcgaaggtc
gagctggtcgagcgcatcctggaacgcggcatcgcggcagatggctcgccggcagcagcg
ccgcacgatccggcacgcgccatcaccaggaaccgccagcccggcaaatgctgcgacacc
ggctgcaccacgcccggccagccggtgatggtcgaactgccggtgtcgctgcgcatctag
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