Vibrio parahaemolyticus UCM-V493: VPUCM_20218
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Entry
VPUCM_20218 CDS
T03116
Name
(GenBank) RND efflux system, outer membrane lipoprotein CmeC
KO
K18139
outer membrane protein, multidrug efflux system
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph01501
beta-Lactam resistance
vph02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VPUCM_20218
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VPUCM_20218
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vph02000
]
VPUCM_20218
01504 Antimicrobial resistance genes [BR:
vph01504
]
VPUCM_20218
Transporters [BR:
vph02000
]
Other transporters
Pores ion channels [TC:
1
]
VPUCM_20218
Antimicrobial resistance genes [BR:
vph01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VPUCM_20218
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
VPUCM_20218
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
VPUCM_20218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AHJ01339
LinkDB
All DBs
Position
2:231280..232656
Genome browser
AA seq
458 aa
AA seq
DB search
MKFKTRLVAAALIAVWLSGCGSLMRSDYQAPEVQVPANWQQMHVAGDVSMDPWWLAFNDP
TLNQYITQVLAQNNDLTLATLTLKKARLQLGLAQDDLFPTLSSSTLGQVQKSLDSGESAD
SYSTNLSVNYELDLWGKISADVDQAKWTAMASQQDREATAQSLVATTASLYWQIGYLKQR
LNLSQRNVADAAQTLQLIEKQYQLGAVDQLDVLEAKRTLASLQAQQSEFEQSLLEANNAF
AILFNQPPKSISVNIQMLPEGDMPSLSVGAPSDLLIRRPDIKAAIYEVKAALENKDAADL
DYLPKLTLTGALGGSSQALKDLLSNPIGSLGADMTLPFLQWNEMKNSQAIADLDYQSAIV
SYRQVLYAAFQDVENALSAREKLKYQAARLQEQYDAASAAESIYAARYQYGSTSIMDYLN
AQEDTRNAQASLLENRYNQFLTQVTLYQSLGGTDVAPL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaaaactcgattggtcgcggctgccttaattgcagtgtggttgtcaggttgt
ggttcgcttatgcgtagcgactatcaagctcctgaggtgcaagtgcctgcaaattggcaa
cagatgcatgttgcgggtgatgtcagtatggatccttggtggttggcgtttaacgaccca
acgcttaatcaatacattactcaggtgttggctcaaaacaacgatttgacgctggcaacg
ctaacgctaaagaaagcgcgtttacagctgggtttagcgcaagatgaccttttccctacg
ttgagttcttccacattaggacaagttcaaaaatctcttgatagcggggaatcggcagat
agctacagcactaacttgtccgtcaattacgagttggatttgtggggaaaaatctcggca
gacgttgaccaagccaagtggacggcgatggcaagtcaacaagatcgcgaggcgaccgca
caaagtttggtggcaacgacggcatcgttatattggcaaatcggctatctaaaacagcgc
ttaaacctcagtcagcgtaatgtggcagacgcagctcaaacgctacaattgattgaaaaa
cagtaccaacttggcgctgtggatcagttagatgtgcttgaagccaaacgtacgttggca
agcttacaagcgcagcaaagtgagtttgaacagagtttacttgaggcaaacaacgccttt
gcgattttgttcaatcaaccgccgaagagcatcagtgtaaacatccaaatgctgcctgaa
ggcgatatgccatcgttgagtgttggtgctccgtctgatttattgatccgcagacccgac
attaaagctgcgatttatgaagtcaaagccgcgctagaaaataaagacgcagcagatttg
gactacttgcccaagctgacgctcactggggctttgggtggatcgtcacaagcgcttaaa
gatctgctttccaacccgattggcagcttaggtgcggatatgacgctaccgtttttgcag
tggaatgagatgaaaaatagccaagccattgctgatttagactatcaatcggctattgtg
agttatcgccaagtgttgtacgccgcatttcaagatgtcgaaaatgctttgtcggcacga
gaaaaattgaagtatcaggcggcgcgtttacaagagcaatatgatgccgcaagtgccgct
gagtccatttatgctgcgcggtatcagtatggctcgacatcgatcatggactatttgaat
gcacaagaagacaccagaaacgcgcaagcttctttgttggagaaccgttacaaccagttt
ctcactcaggttacgctttaccagtctttagggggaaccgacgtcgcgccactgtaa
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