Vibrio parahaemolyticus UCM-V493: VPUCM_2071
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Entry
VPUCM_2071 CDS
T03116
Name
(GenBank) Type I secretion outer membrane protein, TolC precursor
KO
K12340
outer membrane protein
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph01501
beta-Lactam resistance
vph01503
Cationic antimicrobial peptide (CAMP) resistance
vph02020
Two-component system
vph03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VPUCM_2071
09132 Signal transduction
02020 Two-component system
VPUCM_2071
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VPUCM_2071
01503 Cationic antimicrobial peptide (CAMP) resistance
VPUCM_2071
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vph02000
]
VPUCM_2071
02044 Secretion system [BR:
vph02044
]
VPUCM_2071
01504 Antimicrobial resistance genes [BR:
vph01504
]
VPUCM_2071
Transporters [BR:
vph02000
]
Other transporters
Pores ion channels [TC:
1
]
VPUCM_2071
Secretion system [BR:
vph02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
VPUCM_2071
RTX toxin transporter
VPUCM_2071
Multiple protein transporter
VPUCM_2071
RaxAB-RaxC type I secretion system protein
VPUCM_2071
Antimicrobial resistance genes [BR:
vph01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
VPUCM_2071
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
VPUCM_2071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
RNA_pol_Rpb4
Motif
Other DBs
NCBI-ProteinID:
AHJ00030
LinkDB
All DBs
Position
1:complement(2231792..2233063)
Genome browser
AA seq
423 aa
AA seq
DB search
MVKLQRSKIAFALLASTLSLPTYAISIEQAWQQAKQNDPNYEKAKIGVQLGEVGVQSSRS
ALLPGLSASASADWNESSSHSNSYGATLSQTIWDSSLWSELDQANANYLKAQLELSQSHN
ELAQKLLTAYLDVASAQGDLKLAQSKLEEGKELLNIIEKRYRAGKVKSVDVEEMRANQVS
EQASILNAKADLEVKKAELAALINQMPESVDQIRTDSLIQPPMLVDSQEQWLKLAKDSSP
ELLVAAQMVKASEFAKDSAKGGYYPTVKGSVGYSDGDNRSNGEFNAGISLSLPIDLNGAV
RAKVDEASLNILSAKQDMRRVEIDIQKRVIQQFTQVDINWNQVLIANELVESRARVLQSK
EKLYDAGLLEVSEVISAHNSLFEAKNSLQTNLYSYWRKRIGLLQTAGKLDDDTMALISRA
FHS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggttaagctgcaacgatcaaaaatcgcctttgcattgttggcttccacgctcagtttg
ccgacctacgcaatttctattgaacaagcttggcaacaagcaaagcagaacgatccaaat
tacgaaaaagcgaaaatcggcgtccagcttggcgaggttggcgtacagagtagccgcagt
gcgttattaccgggtttaagtgccagtgcgtcagcggattggaatgagtcctcaagccat
tccaacagttacggcgcgaccttatctcaaactatttgggatagcagtttgtggtcggaa
ctggatcaagcgaatgccaattatctcaaagcacagttagagctatctcaatcgcataac
gagcttgcgcagaagttgctcaccgcttacctagatgtggcaagcgcacagggcgacctc
aaattggcgcagtccaagctggaggaggggaaggaacttctcaacatcatcgagaaacgc
tatcgagcaggcaaagtgaagtcggttgatgttgaagagatgcgagcgaatcaagtctct
gagcaagcaagtatcctcaatgcgaaagccgatctcgaagtgaaaaaagcagagcttgcg
gcgttaatcaatcaaatgccggagagtgtcgaccaaattcgaacggattctttgattcag
ccgccgatgctggtggactctcaggagcaatggctaaagctggcgaaagacagtagtcca
gagctgttggtagcggcgcagatggtgaaagcgagcgagttcgcgaaagattcagctaaa
ggtggatactacccgaccgtcaaaggcagtgtgggctacagcgatggtgacaatcgttca
aacggcgagtttaacgctgggattagtttgagtttgccgattgacctcaatggtgcagtg
cgagcgaaagtggacgaagcatcgttgaacattttaagcgccaagcaagatatgcgtaga
gtggaaattgatattcagaaacgagttattcagcagtttacgcaggtcgatatcaattgg
aatcaagttttaatagcgaacgagctggttgagtcgcgcgccagagtgttgcaaagcaaa
gagaaactttacgacgctggtctgcttgaagtgtcggaagttatcagtgcacacaacagc
ttgtttgaggcgaaaaacagtctgcaaaccaacttgtacagctactggcgtaagagaatc
ggcttactgcaaaccgcagggaaactcgatgacgataccatggcgttgatctctcgagct
tttcattcatga
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