Vibrio ruber: RND59_04970
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Entry
RND59_04970 CDS
T09542
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
vru
Vibrio ruber
Pathway
vru01501
beta-Lactam resistance
vru02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RND59_04970
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RND59_04970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vru02000
]
RND59_04970
01504 Antimicrobial resistance genes [BR:
vru01504
]
RND59_04970
Transporters [BR:
vru02000
]
Other transporters
Pores ion channels [TC:
1
]
RND59_04970
Antimicrobial resistance genes [BR:
vru01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RND59_04970
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
RND59_04970
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
RND59_04970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WNJ96452
LinkDB
All DBs
Position
1:1072131..1073579
Genome browser
AA seq
482 aa
AA seq
DB search
MKHLVKHFSIAITLSLCGCAAPNSIQPKNHLTDQAVLAHSHQLNHPQLSPAKWPAQIWWQ
QLGDTQLDHLIQTALNHSPTMQLADANLVNASAMVMAANAQFDPTLSATAGATRSRLSRS
EDSTLQGNRYGTLYTLGLTGNYTFDLWGGNRDIWEASVNNQRAAEIDHQAAKITLSSAIA
QTYIQLSNAYALQDLARQDLERTQRIVEITQRLLKNGLTSEDRLYTAQSSAAAARQIVKQ
RALVIRQLKNALATLVGQGPDLATTIQRPSIQMKTALSLPQNLPASLLSHRPDIVAAKWR
VEAMSKEIDAAKTRFYPNVNLSFWAGFKAMLGDAVFEDVSRSWRVGPAISLPLFTRDLKA
NLIEKTAGYDRAVAQYNDTLIKALGEVSDNILIIRSLELQLKDAQQSMRLADKSYHITEK
RYEAGMGSHLEVLLAEQQLIQAESSFTQLKNQQQEQQVYLIRSLGGGFHNTPPSDHLTTT
AN
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatttagtgaagcacttttctattgccatcaccttgagcttgtgtggctgtgct
gcgccgaatagcattcagcccaaaaatcaccttacagatcaagcggttttagcccacagt
catcagttaaatcatcctcaactatcgccagccaaatggcctgctcaaatctggtggcaa
caattgggggatacacaattggatcacctgatccaaacggctttaaatcacagtccgacg
atgcagttagcagatgcgaatctggtcaatgcatcagccatggtcatggctgccaacgca
cagtttgatccgaccttgtctgcgaccgcaggagcaacacgctccagactttcccgttct
gaagattccacgctgcaaggcaatcgttacggcacactgtacaccctcgggctaacggga
aactatacattcgatctgtggggcggcaaccgtgatatctgggaagcctccgtcaataac
caacgcgcagccgaaatcgatcatcaggcagcgaaaattacactttccagcgcaattgcc
cagacctatatacaactgtccaatgcttatgcactacaagatttagcgcgacaagatctt
gagcgaacccagcgtattgtcgagattacccagcgcctgctgaaaaatggtttaacctca
gaagatcgcttatacaccgctcaaagcagtgcggcagcagcaagacaaattgtgaagcaa
cgggctttggtgattcgccaactgaaaaatgcactggcaacattggtgggacaagggccg
gatctggcgacaacgattcaacgcccttcgatacaaatgaaaactgcactatcactgcca
cagaacctcccggccagcctgctgtctcatcgtcccgatattgtcgctgccaagtggcgc
gttgaagcgatgagcaaagaaatcgatgcggccaaaacacgtttctatccgaatgtaaat
ttaagcttctgggctggattcaaagccatgctcggggatgccgtatttgaggatgtcagc
cgttcatggcgggtggggccggcaatttccctgcccctatttaccagagatttaaaagcg
aatctgattgagaaaacggctggctatgatcgcgcggtcgcccaatacaatgacacattg
atcaaggcgctgggcgaagtgagcgataacatactgatcatcagatcactcgagttacag
cttaaagatgctcagcaaagtatgcgattggctgacaaaagttaccatattacagaaaaa
cgctatgaagcaggcatggggagccatcttgaggtgcttctggcggagcaacaactgatt
caggcagaatcatcatttactcagctaaaaaatcagcagcaagaacagcaagtttactta
atacgttcattgggaggcggctttcacaatacgcctccaagcgatcatctcacgaccaca
gcaaattaa
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