Vibrio ruber: RND59_20290
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Entry
RND59_20290 CDS
T09542
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
vru
Vibrio ruber
Pathway
vru01501
beta-Lactam resistance
vru02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RND59_20290
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RND59_20290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vru02000
]
RND59_20290
01504 Antimicrobial resistance genes [BR:
vru01504
]
RND59_20290
Transporters [BR:
vru02000
]
Other transporters
Pores ion channels [TC:
1
]
RND59_20290
Antimicrobial resistance genes [BR:
vru01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RND59_20290
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
RND59_20290
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
RND59_20290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF5017
Motif
Other DBs
NCBI-ProteinID:
WNJ97537
LinkDB
All DBs
Position
2:1032334..1033722
Genome browser
AA seq
462 aa
AA seq
DB search
MFKPVFNIVISTLLISGCTTLTHTKFTPPQVDIPATWQTQQVNEQVSLNPWWERFNDPQL
NQLIQQMLRINNDLALATLTLQKARLEAGLSETDQYPELSSTLATSHLKRLDSGSNSKSY
SANLSISYELDLWGRVASSVNAAQWTAIASAADRESTAQSLASTTASLYWQIGYLKERVA
LSNKSITYAKQVLALTQRQYHSGAVSELDVLEAKRSLAGQQAAHSDLLQSLTEAENAMAM
LFNQPPKQPELQIQSLPQAPIPEIAAGIPADLLVRRPDVKAALYELKSALATSDATVAGY
LPTLTLTGSVGDSSAQLRDLLTDPLGTLSAEIILPFLQWNKMSLNQKIAETNYQTALVNY
RQTLYTAMKDVDNALSAKQHYQYQGLRLKEQYDAATAAEQIYASQYHHGAVSIRDWLDAQ
ETQRSAQESLLENRYNQYQIQATVYQALGGSDIAPPLAAENP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaccagtgtttaacattgtcatatcaactctgctgatatcgggttgtaccacg
ctcacccacaccaagttcacaccgccacaggtagacattccggccacatggcagacacaa
caggtgaacgaacaggtcagccttaacccatggtgggaacgatttaacgatccacagctc
aaccaactcattcaacagatgctacgcatcaataatgatctggcattggcaactctcacg
ctgcaaaaagcacgtctggaagccggtttgagtgaaaccgatcaatatcctgaattatca
tccacactggcaacgtcacatttaaaacggttggattcaggcagcaatagtaaaagttac
tcagccaacctctctatcagttatgaattggatctatggggacgtgtcgcttcatccgtc
aacgcagcccaatggacagcaattgccagcgccgcagaccgggaaagtaccgctcaaagc
ctcgcctcaacaacggcttcactctattggcaaattggttatctgaaagagcgggtggca
ctcagtaataagagtatcacctatgccaaacaggttctggcactgactcaacgccaatat
cacagtggtgcggtttctgaattggatgttctggaagccaaacgcagtttagccggacaa
caagccgcgcacagtgacctactgcaatctttgactgaagctgagaatgcgatggcgatg
ctcttcaatcagccgccaaaacagcctgagttacagattcagtcacttccccaagcccct
attcctgaaatagctgccggtatcccggcggatttgttggtcagacgaccagatgttaaa
gcggcactctatgaactgaaatcagcactggcaaccagcgatgccactgtggccggatat
ttaccgacactgactctcaccggctctgtcggggattcatctgcccaattgcgcgatctg
ctgaccgatccactcggcacactgagcgctgaaataatcctgccttttttgcaatggaat
aagatgtcactcaaccaaaaaatcgccgaaaccaattatcaaacggcactggtgaactac
cgtcagaccctctatacggcaatgaaagatgttgataatgcactctcggcaaaacagcac
tatcaatatcaggggctcagactcaaagaacagtatgatgcagctaccgccgcagaacag
atttatgccagtcaatatcatcatggcgcagtaagtatccgagactggctggatgcacaa
gaaacccagcgtagcgcacaggaatcactactggagaatcgctacaaccagtatcaaatt
caggccacggtatatcaggcgctggggggaagtgatatcgcgccaccattggcggcagaa
aatccttaa
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