Vibrio scophthalmi: VSVS12_02594
Help
Entry
VSVS12_02594 CDS
T04650
Name
(GenBank) Outer membrane protein TolC
KO
K12340
outer membrane protein
Organism
vsc
Vibrio scophthalmi
Pathway
vsc01501
beta-Lactam resistance
vsc01503
Cationic antimicrobial peptide (CAMP) resistance
vsc02020
Two-component system
vsc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VSVS12_02594
09132 Signal transduction
02020 Two-component system
VSVS12_02594
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VSVS12_02594
01503 Cationic antimicrobial peptide (CAMP) resistance
VSVS12_02594
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsc02000
]
VSVS12_02594
02044 Secretion system [BR:
vsc02044
]
VSVS12_02594
01504 Antimicrobial resistance genes [BR:
vsc01504
]
VSVS12_02594
Transporters [BR:
vsc02000
]
Other transporters
Pores ion channels [TC:
1
]
VSVS12_02594
Secretion system [BR:
vsc02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
VSVS12_02594
RTX toxin transporter
VSVS12_02594
Multiple protein transporter
VSVS12_02594
RaxAB-RaxC type I secretion system protein
VSVS12_02594
Antimicrobial resistance genes [BR:
vsc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
VSVS12_02594
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
VSVS12_02594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
PucR
Motif
Other DBs
NCBI-ProteinID:
ANS86350
UniProt:
A0A1B1NRN0
LinkDB
All DBs
Position
1:2850002..2851318
Genome browser
AA seq
438 aa
AA seq
DB search
MKKLLPLIISAALGSLSTSAWADTLTDIYNQAKENDPTLLSSAAKRDAAFEAIEENRSTL
LPQINLTAGYDLTRGDSDSDALTAGVNFSQELFKRSSWISLDTSEMSARQADAAYAASQQ
ALILRVSQAYFDVLRAQDNLVFVQAEKAAVARQLEQTKQRFEVGLSAITDVHDAQAQYDS
VLADEVLAQNSLVNSYEGLREITGQEHANLEVLDTKRFSASKTSTAINTLVEEAGQKNLS
LLAARITQDIAKENISLASSGHLPSLTLDGGYNYRDISNTDVNPITQRNSDGDEGNFNVG
LNLVVPLYTGGNITSQTKQAEFAYVAASQDLEATYRTVVKDVRAFNNNISASIGALRAYE
QTVISAESALEATEAGFDVGTRTIVDVLDSTRRLYDANKSLSNARYDYILSVLQLRQAVG
TLSEQDILDVNAGLKPAK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattgcttccacttattatcagtgcagcactcggtagtcttagcacttctgct
tgggcagatacgctgacagacatttacaaccaagcgaaggaaaacgatccgacgctacta
agctctgcagcaaaacgtgatgctgctttcgaagcgattgaagaaaaccgcagtactttg
ctaccacaaattaacttaaccgcaggctatgacctgactcgtggtgacagtgatagtgac
gcattaacggctggcgtaaacttctcgcaagagcttttcaaacgttcaagttggattagc
ttagatacttctgaaatgtcagcgcgccaagcagacgcggcatacgcagcgagtcaacaa
gctttgattctacgtgtttctcaggcttactttgatgtattacgcgcacaagataacctc
gtgttcgttcaagcagagaaagcggcggttgctcgccaactcgaacaaactaaacagcgt
ttcgaagtaggtctatcagcaattaccgacgtgcacgatgcacaagcacaatacgactca
gtattggctgatgaagtactggcgcaaaacagcctcgtcaacagctacgaaggtctacgt
gaaatcactggccaagagcatgcaaatcttgaagtattggatactaaacgcttctcagca
agcaaaacatcaacagcaatcaatacgcttgttgaagaagctggtcagaagaacctaagt
ctattggcggcgcgtattacccaagacatcgctaaagagaacatttcattagcaagctct
ggtcacctaccatcactgactcttgatggtggctacaactaccgtgatatcagtaatacc
gacgtaaaccctatcacacaacgtaattctgacggtgacgaaggtaatttcaatgttggt
ttgaacctagttgttcctctatatactggtggcaacatcacttcgcaaaccaaacaagca
gaatttgcttatgttgcggctagccaagatcttgaagcgacatatcgtacagtcgttaaa
gatgttcgcgctttcaacaacaatatcagcgcttcaattggtgcattgcgtgcttacgaa
caaaccgtaatttcagcggaatctgcactagaagcaaccgaagcaggtttcgatgtaggt
actcgtactatcgttgacgtactagactcaactcgccgtctatatgacgcgaataagagc
ctatcaaacgctcgttacgactacattctaagcgtactgcaactgcgtcaagcggtgggt
acactgagtgagcaagatatcctagatgtgaatgcaggtcttaaaccggcaaaatag
DBGET
integrated database retrieval system