Vibrio mediterranei: BSZ05_04080
Help
Entry
BSZ05_04080 CDS
T04936
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
vsh
Vibrio mediterranei
Pathway
vsh01501
beta-Lactam resistance
vsh01503
Cationic antimicrobial peptide (CAMP) resistance
vsh02020
Two-component system
vsh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
BSZ05_04080
09132 Signal transduction
02020 Two-component system
BSZ05_04080
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BSZ05_04080
01503 Cationic antimicrobial peptide (CAMP) resistance
BSZ05_04080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsh02000
]
BSZ05_04080
02044 Secretion system [BR:
vsh02044
]
BSZ05_04080
01504 Antimicrobial resistance genes [BR:
vsh01504
]
BSZ05_04080
Transporters [BR:
vsh02000
]
Other transporters
Pores ion channels [TC:
1
]
BSZ05_04080
Secretion system [BR:
vsh02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
BSZ05_04080
RTX toxin transporter
BSZ05_04080
Multiple protein transporter
BSZ05_04080
RaxAB-RaxC type I secretion system protein
BSZ05_04080
Antimicrobial resistance genes [BR:
vsh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
BSZ05_04080
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
BSZ05_04080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
LntA_helical
CCP_MauG
Motif
Other DBs
NCBI-ProteinID:
ASI89069
UniProt:
A0AAN1KM47
LinkDB
All DBs
Position
1:905161..906474
Genome browser
AA seq
437 aa
AA seq
DB search
MKKLLPLFITAALGSVSAAAWADSLTEIYDQAKQNDPQLLRAAAQRDRAFEAINSARATL
LPQINLTAGYNAVRSDIDTADSDKLSAGVGFSQELYNRTSWITLDSAEKTARQADSQYAA
AQQDLILRTAQAYFEVLRSKDNLESVRANKAAVARQLEQTKQRFEVGLSAITDVHDAQAQ
YDRVLADEVVAENNLLNQYEALREITGQEHKNIDVLDTDRFSAARPEQSVTFFLEEAQNK
NLDLLSARIGQDIAKDNITLASSGHLPKLTLDGGYNYGNERNSNNVASQFDGSNAFNAGI
NLSVPLYTGGNITSQTKQAEFAYVEASEQLEQTYRSVVKNVRANNNNINSSIGAIRAYEQ
TVISAESALEATKAGFDVGTRTIVDVLEATQALYNAESNLSDSRYDYIISILNLRQSVGT
LSEQDIVDINAGLKKAK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactgcttccattatttatcacagctgcattaggaagcgtaagtgcagcggca
tgggccgactccctaacggaaatctacgatcaagctaaacaaaacgatcctcagctacta
agagctgcggcacaacgtgatcgtgcatttgaagccattaactctgctcgtgcgactctg
ttgccacaaattaacttaacagctggttataacgcagtaagaagcgatatcgatactgcc
gatagtgacaaactgagtgctggtgttgggttctcacaagagctttataaccgtactagt
tggatcacgctagacagtgctgagaaaacggctcgtcaagcagactcacaatacgctgca
gctcaacaagacctaatcctacgtactgcacaagcttacttcgaagtactacgttcaaaa
gataaccttgaatcggttcgcgctaacaaagcggcggttgctcgtcagctagaacaaacc
aaacaacgttttgaagtaggtctttcagccattactgacgttcacgatgcacaagcacag
tacgaccgagtgttggccgacgaagttgttgcagaaaacaacttacttaaccaatatgaa
gcgcttcgcgaaattacaggtcaagagcacaagaacatcgatgttcttgataccgaccgc
ttctcagcagcgcgtccagagcaatctgtgactttcttcctcgaagaggcccagaataag
aacctagatttgctttctgcgcgtatcggtcaagacattgcaaaagacaacatcacatta
gcaagttctggtcaccttccgaaactaacattggatggtggttacaactacggcaacgaa
cgtaacagtaacaacgtagctagccagtttgatggaagtaacgcttttaatgccggtatt
aacctatcagtacctctatacactggtggcaacattacctcgcaaaccaaacaagcagag
ttcgcgtacgttgaagcaagtgaacagctagagcaaacttaccgctcagttgtgaagaat
gttcgtgcaaataacaacaatatcaactcttctattggtgctattcgcgcttatgagcaa
acggtgatttctgcagagtctgcactagaagccactaaagctggttttgatgttggtact
cgtactatcgttgacgtgttagaagccactcaggcactttataacgccgagagcaacctt
tctgattcacgctacgactacatcattagtattctgaacctacgtcaatcggtaggtaca
ttaagcgagcaagatatcgttgatatcaatgctggccttaagaaagcgaagtaa
DBGET
integrated database retrieval system
