Vibrio splendidus: LTQ54_20050
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Entry
LTQ54_20050 CDS
T08240
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
vsl
Vibrio splendidus
Pathway
vsl01501
beta-Lactam resistance
vsl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LTQ54_20050
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LTQ54_20050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsl02000
]
LTQ54_20050
01504 Antimicrobial resistance genes [BR:
vsl01504
]
LTQ54_20050
Transporters [BR:
vsl02000
]
Other transporters
Pores ion channels [TC:
1
]
LTQ54_20050
Antimicrobial resistance genes [BR:
vsl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LTQ54_20050
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LTQ54_20050
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LTQ54_20050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF3209
DUF1281
Motif
Other DBs
NCBI-ProteinID:
UOE87487
LinkDB
All DBs
Position
2:complement(906899..908266)
Genome browser
AA seq
455 aa
AA seq
DB search
MNTHRPLSALLLLGSLTYLTGCASLSPTPQASLNNTTQIPDQWESSQRYVNTTMSTQLLS
LFNNQALADLVQEALTNNHDLHKTALRLKQAELLAAQSDQYLQPSLNTDFQASRQKTSQI
QNSHKLSLNLSWEFDVWGRLADSASAANAKQQATQLDYVYAQNSLAARVIETWLDVAYRA
RVIGVEQHWLQSLSNTENIVLEQVLDGFKEQADLDTARAATSRVRASLAAKEQDQLIAIR
GLNTLRGKSDTQLNRMIFTIPDVEAPPLRLPGEMIGSRPDLLAAYQQVLAADKSAAVAYK
DLLPKFTLSASVYRSGSTPNQLIDNPSLWNLVGGISAPLLDQSSLQTQAKIAQLQAEESF
VDYQKKLLVAINEVGNALDKEFYLKQQEQHYRDAFTFSKASMKNYQNLYQEGASDVLALL
IAQQSIYQSKIQLLNTQRTRLSNRITLGLALGMGV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacaccgccccctatccgcgttattactactgggtagtctgacctatctcacg
ggttgcgcttctctatcaccaacgccgcaagccagtttgaacaatacaacccagattccc
gaccaatgggaaagctctcaacgatacgtaaacactacgatgtcgacacaattgctctcg
ctgttcaacaatcaagctctcgccgatctggttcaagaagccctcaccaataaccacgac
ctacataaaactgcacttcgcttgaagcaagctgaactattagcggctcaaagtgatcaa
taccttcaaccttctttaaatacagactttcaagcctctagacaaaaaacaagtcagatt
cagaacagtcacaaactatctttgaatttaagttgggagtttgatgtttggggacgctta
gctgactcagcaagcgcagctaacgcgaaacaacaggcaacacaacttgactatgtttac
gcacaaaactctctcgcggctcgcgtaatagagacatggcttgatgttgcttacagagca
agagtgataggggttgagcaacactggctacaaagcctttcaaacactgagaatattgta
ctagaacaagtgctcgatgggtttaaagaacaagcagacctcgacacagctcgtgctgca
acatccagagtaagagcgagtttagcggctaaagaacaagatcaacttatcgcaatcaga
gggcttaataccttgcgaggtaagagcgacacccagcttaaccgaatgattttcacgatc
ccagacgttgaagctccgccattacgtcttcccggagaaatgattggatctcgtcctgac
ctccttgccgcttatcagcaagtgctcgccgccgacaaaagcgcggcagttgcttacaaa
gatctactgcctaaattcacgctgtctgcctctgtttatcgtagcggttcaacaccaaac
cagcttatcgacaatccttccctgtggaatctcgttggggggatcagcgcacctcttctt
gaccaatcatcactacaaacccaagcaaaaatagctcagcttcaagcagaagagagcttt
gttgattaccaaaagaaactattggttgccatcaatgaggtaggaaatgcactagacaaa
gagttctacctcaaacaacaagaacagcattatcgagatgcttttacattctccaaggct
agtatgaaaaactatcaaaacctttaccaggaaggagccagtgacgttttggcactgctt
atcgcccaacaatctatttaccaatctaaaatccagttgcttaatactcagcgtactcgg
ctctcaaacagaattaccttagggttagcattaggaatgggggtttaa
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