Vibrio atlanticus: VS_II0860
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Entry
VS_II0860 CDS
T00812
Name
(GenBank) ABC transporter: Outer membrane protein (OMP)
KO
K12340
outer membrane protein
Organism
vsp
Vibrio atlanticus
Pathway
vsp01501
beta-Lactam resistance
vsp01503
Cationic antimicrobial peptide (CAMP) resistance
vsp02020
Two-component system
vsp03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VS_II0860
09132 Signal transduction
02020 Two-component system
VS_II0860
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VS_II0860
01503 Cationic antimicrobial peptide (CAMP) resistance
VS_II0860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsp02000
]
VS_II0860
02044 Secretion system [BR:
vsp02044
]
VS_II0860
01504 Antimicrobial resistance genes [BR:
vsp01504
]
VS_II0860
Transporters [BR:
vsp02000
]
Other transporters
Pores ion channels [TC:
1
]
VS_II0860
Secretion system [BR:
vsp02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
VS_II0860
RTX toxin transporter
VS_II0860
Multiple protein transporter
VS_II0860
RaxAB-RaxC type I secretion system protein
VS_II0860
Antimicrobial resistance genes [BR:
vsp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
VS_II0860
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
VS_II0860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
CAV26659
UniProt:
B7VSP3
LinkDB
All DBs
Position
2:956677..958101
Genome browser
AA seq
474 aa
AA seq
DB search
MWRYRNLTSSIMAALAFSTTPSASATTLLEAVELGLQNSLSLRASDKGVEENEYNIGISR
SKFLPSLNGAADTTWNENETLLSSVPDETSSYNSNSYSLSLSQSIFNLGDIFKYGTAKLD
FNIEEIKHENKIQSTISEIGSQYFEYLKNNAQIKATKVELKSSETREHQMRRNVELGNTA
ASELYEVIAQKEGVSNRLRTLQKDRRVILNGLSIQIQYPITPSQDIYESVPLKEINKSEQ
HSIMDQALKLNNDLLVAKKNVERSRRSLKESGTNFLPTVSLSASYRHDDANNYDKTDITA
TGESNSTSVGLNLALPILSGGSDYYGYQKSSTAIERTELLYQDSLYTTRNSVNTSVLNIN
DFSQSISSYENIIRANYASYKGIQRAYQLGTRTITDLLAAESKLFSALRDYESARYDYII
ETIKLEQVKGVLSIQSIESIMQLMSDIEGRNNQELVPKHLLSTESLKTGGRNAN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtggcggtacagaaacttaactagcagcattatggctgcgcttgcattcagcacaaca
ccttcagcatcggcgacgaccctgcttgaggcggtcgaactcggcctgcaaaatagcctg
tcccttcgagccagtgataaaggtgtggaagagaacgaatacaacattgggatcagccga
tctaagtttctaccttcactcaatggtgcagccgataccacatggaatgaaaacgaaacc
ttgctatcaagcgtgcccgacgaaacctctagctataactcaaacagctacagtctttct
ctttcccagtcgatattcaatcttggtgatattttcaaatatggtacggcaaaactcgac
ttcaatattgaagaaattaaacacgagaacaaaatccaaagcaccatctctgaaatcggc
tctcaatacttcgagtatttgaaaaacaatgcacaaataaaagcgaccaaggtcgaactt
aagtcgtctgagactcgtgaacatcaaatgcgacgcaatgtggaactcggcaatacagcc
gccagtgagctgtacgaagttatcgctcagaaagaaggcgtgtcgaatcgattaagaacc
ttacagaaagaccgtcgcgtcattctcaacgggctctccattcagattcagtaccctatc
actccatcacaagatatatacgaaagtgtgccattaaaagagataaacaaaagcgaacaa
cactcaatcatggatcaagcgttaaagctcaacaacgacttactagtagccaagaaaaac
gtcgagagaagccgtagaagcttaaaagagagcggtacaaacttcttacctaccgtgtca
ctctcagccagctatcgtcacgatgacgccaataactacgataaaaccgacatcacagcg
acaggcgaaagcaactcaacgagcgttggcttgaacctagccttgcctattttgtctggt
ggttctgattactatggatatcaaaaatcatcgacggcaattgaacgtactgaactgctt
tatcaagattcgctttacacaacacggaacagcgtaaacacctctgtgctcaacataaat
gatttctcgcaatctataagcagttacgaaaacatcattcgcgccaactacgcctcttac
aaaggaatccaaagggcctaccaattaggcacacgtaccatcaccgatttattggccgct
gaaagtaaactgttcagcgccttaagagactatgaaagtgcacgatacgactacatcatc
gaaaccatcaagcttgagcaagttaagggcgtgctttcaattcaatctatcgaaagcatc
atgcaattgatgagcgatatcgaagggcgaaacaatcaagaattagtgcctaaacacctt
ctctcaactgaatcgttgaaaacaggaggtcgtaatgcaaactga
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