Vibrio spartinae: Vspart_00224
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Entry
Vspart_00224 CDS
T07037
Symbol
oprM_1
Name
(GenBank) Outer membrane protein OprM precursor
KO
K18139
outer membrane protein, multidrug efflux system
Organism
vsr
Vibrio spartinae
Pathway
vsr01501
beta-Lactam resistance
vsr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Vspart_00224 (oprM_1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Vspart_00224 (oprM_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsr02000
]
Vspart_00224 (oprM_1)
01504 Antimicrobial resistance genes [BR:
vsr01504
]
Vspart_00224 (oprM_1)
Transporters [BR:
vsr02000
]
Other transporters
Pores ion channels [TC:
1
]
Vspart_00224 (oprM_1)
Antimicrobial resistance genes [BR:
vsr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Vspart_00224 (oprM_1)
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Vspart_00224 (oprM_1)
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Vspart_00224 (oprM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QMV13019
LinkDB
All DBs
Position
1:complement(260443..261891)
Genome browser
AA seq
482 aa
AA seq
DB search
MKHLLKHSAIAITLILCGCAAPNNIQPKNHLVDQAILAHSHQLNHPKLSPANWPTQIWWQ
SLGDTQLDHLVQTALNHSPTMQLADANLVNASAMVMAANAQFDPTLSATAGATRSRLSRS
EDSTRQGNRYGTLYTLGLTGNYALDLWGGNRDAWEASVNYQRAAEIDHQAASMTLSSAIV
QTYIQLSNAYALQDLARQDLQRTQRIVDITQRLLKNGLTSEDRLYTAQSSTAAAKQILKK
RSLAISQLKNALATLVGQGPDIATTIQRPSILMETALALPPHLPASLLSHRPDIVAAKWR
VEAMSKEIDAAKTRFYPNVNLSFWAGFKAMLGDAVFEDVSRSWRVGPAISLPLFTRDLKA
NLIEKTAGYDRAVAQYNDALIKALGEVSDNILIIKSIALQLNDAQQSMRLADKSYHITEK
RYEAGMGSHLEVLMAEQQLIQAESSFTQLKNQQQEQQVHLIRSLGGGFDNSSPSDHLTTI
AN
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatttactgaagcattcagccattgccatcaccttgattttgtgtggttgtgct
gcgccaaataacattcagccgaaaaatcacctcgtagatcaagcgattttagcccacagt
caccaactgaatcatcccaaactgtcaccggccaattggccaactcaaatatggtggcaa
tcattgggtgatactcagttggatcatttggtccagacagccttaaaccatagcccgacg
atgcagttggcagatgcgaatctggtcaatgcatcagcaatggtcatggcagccaacgcc
caatttgatccgacattgtctgcaaccgcaggagcaacacgctccagactttcccgttct
gaagattccacacgacaaggaaaccgttatggcacactttacacccttggcctgacggga
aattatgctctcgatctgtggggcggaaatcgtgatgcctgggaggcctctgttaattat
caacgtgccgctgaaattgatcatcaagcagcgagcatgacgctttccagtgccattgtt
caaacctatattcagttgtctaatgcttacgcactacaagatttagcccggcaagatctg
caacgaacccaacgcattgtcgatatcacccagcgtctgctgaaaaatgggttaacctca
gaagatcgcttatataccgctcaaagcagcacggcagcggcgaaacaaatcctgaaaaaa
cgttctctggcgattagccaactgaaaaacgcattggcgacattggtcggacaaggaccc
gatattgcgaccacgattcaacgcccttcaatactgatggaaacagcactcgcactgccc
ccccatctccctgcgagcctgctctctcatcgccctgatattgtcgcagccaaatggcga
gttgaagcaatgagtaaagaaatcgatgcggcgaaaacacgtttttatccaaatgtgaat
ttaagcttctgggctggattcaaagccatgcttggcgatgcagtatttgaggatgtcagt
cgttcatggcgcgtgggaccggcgatttccctgcccttatttacccgagatttaaaagcc
aacctgattgagaagaccgcaggctatgatcgtgctgtcgcacaatacaatgacgcattg
ataaaggctctgggcgaagtgagtgataacattctgatcatcaaatcaatcgcgttacaa
ctcaatgatgcccagcaaagtatgcgtctggctgacaaaagttaccatattacagaaaag
cgctatgaagccgggatgggcagtcatcttgaagtcctcatggcggaacaacaactgatt
caagcagaatcatcattcacacagttgaaaaaccagcaacaggaacaacaagttcactta
atacgttcattgggaggcggtttcgataattcgtctccaagcgatcatcttacgaccata
gcaaattaa
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