Xenorhabdus bovienii SS-2004: XBJ1_1814
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Entry
XBJ1_1814 CDS
T01186
Symbol
tolC
Name
(GenBank) outer membrane channel; tolerance to colicin E1, segregation of daughter chromosomes, role in organic solvent tolerance
KO
K12340
outer membrane protein
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo01501
beta-Lactam resistance
xbo01503
Cationic antimicrobial peptide (CAMP) resistance
xbo02020
Two-component system
xbo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
XBJ1_1814 (tolC)
09132 Signal transduction
02020 Two-component system
XBJ1_1814 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
XBJ1_1814 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
XBJ1_1814 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xbo02000
]
XBJ1_1814 (tolC)
02044 Secretion system [BR:
xbo02044
]
XBJ1_1814 (tolC)
01504 Antimicrobial resistance genes [BR:
xbo01504
]
XBJ1_1814 (tolC)
Transporters [BR:
xbo02000
]
Other transporters
Pores ion channels [TC:
1
]
XBJ1_1814 (tolC)
Secretion system [BR:
xbo02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
XBJ1_1814 (tolC)
RTX toxin transporter
XBJ1_1814 (tolC)
Multiple protein transporter
XBJ1_1814 (tolC)
RaxAB-RaxC type I secretion system protein
XBJ1_1814 (tolC)
Antimicrobial resistance genes [BR:
xbo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
XBJ1_1814 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
XBJ1_1814 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Dak2
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CBJ80940
UniProt:
D3V2H5
LinkDB
All DBs
Position
1772878..1774242
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AA seq
454 aa
AA seq
DB search
MKKLLSLFIAMNLVGFSTLSHAEDLLQIYKQAKETNPELLKAQADRNSIIEKINEVRSPL
LPQLGLNAGVDYGKSFRSKADSESYGTNAKLQLTQTIFDMSKWYQLNQAEKSAGIADISY
QIAQQKLILDTAKAYFDVLSKIDALTYTEAQKASLYRQLDQSSQRFKVGLVAITDVQNAQ
AQYDTILALEVSDRNNLENSLEGLRLMTGIYYPQLASLNIDRFKTNQPNPVDSVRKEAET
RNLSLLSARLTQDLKREFIKDARTGYMPTINLTASTGVINSHKRGTQRIDSYDGGNNVGL
SLSLPLYSGGLTNSQVEQAKYNFVSASQDLENTYRKVIQDVHSSSNNLSASISSIKANKQ
AVVSTQSSLDSMEAGYQVGTRTIVDVLDATTKLYQAKQSLSKARYDYLINQLVNKQARGT
LNEDDLVALNSILGTKISTDSSNIIKEMKTPTTR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattgctctctctttttatcgctatgaatctggtaggtttcagcactttaagc
catgcagaagatctattacaaatttacaagcaggcgaaagaaactaaccccgaattgctt
aaggcgcaggctgaccgcaattcaattattgaaaaaattaatgaagtccgtagccctttg
ttaccacagcttgggctgaatgctggtgttgactacggcaaaagttttcgcagtaaagca
gactcagaaagctatgggacaaatgcaaaactgcaactgacgcaaaccattttcgacatg
tcaaaatggtatcaactgaatcaggctgaaaaatctgcaggtatcgctgatatcagttac
cagatcgcccagcaaaaattaattttggatacagccaaagcttatttcgatgtcttgagt
aaaattgatgcgttaacctataccgaagcacagaaagcctcgctgtaccgccaattggat
caatcaagccaacgctttaaggttggtctggttgccattaccgacgtacaaaacgcccaa
gcccaatacgataccattcttgcgttagaagtttcagatcgtaacaatctggaaaattcg
ctggaaggactgcgtctgatgacaggaatctactacccacaactggcttcattgaatatt
gaccgattcaaaaccaatcaacctaatcccgttgattctgtgcggaaagaagccgaaacc
cgcaacttaagcctgttatcagcacgtttgacacaggatctaaaacgcgaatttatcaaa
gatgcgcggacaggctacatgcctactattaatttgacggcaagcactggggtcatcaat
agccataaacgtggtacccaacgaattgattcctacgatggcggtaacaacgttggttta
tcattaagcctgccactttatagcggcggtctcaccaattctcaggtcgaacaggcaaaa
tataactttgtcagtgccagtcaggacttggagaatacctatcgcaaggttattcaggat
gttcactcctcctccaataacctttccgcttctatcagcagcattaaagccaataaacag
gcagttgtttctacacaaagttctctggattcaatggaagccggttatcaggtaggaacc
cgtaccattgttgatgttctggacgccacaaccaagctgtatcaagccaaacagagccta
tccaaggcacgttatgactatctgattaatcaactagtgaataagcaggctcgtggcacc
ttaaatgaagatgatttggtggcactcaatagtattttaggcacaaagatctcaacggat
tctagcaatattattaaagagatgaaaacaccaacaactcgctga
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