Xanthomonas citri subsp. citri UI6: J158_03012
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Entry
J158_03012 CDS
T03894
Name
(GenBank) efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
xcj
Xanthomonas citri subsp. citri UI6
Pathway
xcj01501
beta-Lactam resistance
xcj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xcj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J158_03012
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J158_03012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xcj02000
]
J158_03012
01504 Antimicrobial resistance genes [BR:
xcj01504
]
J158_03012
Transporters [BR:
xcj02000
]
Other transporters
Pores ion channels [TC:
1
]
J158_03012
Antimicrobial resistance genes [BR:
xcj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
J158_03012
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
J158_03012
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
J158_03012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF5396
Arm-DNA-bind_3
Motif
Other DBs
NCBI-ProteinID:
AJY87383
LinkDB
All DBs
Position
complement(3319245..3320756)
Genome browser
AA seq
503 aa
AA seq
DB search
MTTIRTTLCALGVASVLSGCTLMPRYTRPDAPVPAQFAGTDVSVAPPAAAATADTGNNAD
TAYIADIGWRQVFTDPTLQQVIALALDNNRDLRVAALNIEVARAQYRVDRAALLPAIDGT
GTANNARTPSELAIPGQPQVFRTYSANIGISAYELDLFGRVRSLKEQALQQFLSTAEARR
STHISLVAEVATAYLTLAADQQLLQLAQSTLTSQSDSYRLQQRSFELGVASQLTLRQAQT
TVETARVDVERYTAQVAQDRNALVLLVGTQVPVELLPHALPDNASVEGNVLASVPAGLPS
QLLQRRPDILEAERNLRAANANIGAARAAFFPSISLTASTGSSSSSLSRLFDAGTRAWSF
VPTLTLPIFNAGRNRANLDMAKANRDIEVARYEKSIQSAFREVSDALAQRDTLGRQLQAQ
QALVDATADSYRLSQARFERGIDSYLQALDAQRSLYSAQQTLINTQLSRFTNLVTFYKAM
GGGWLQTAAPTAVASPAAEPPRG
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgattcgcacgacactctgcgcgcttggcgtggccagcgtgctttccggttgc
acgctgatgccgcgctacacgcggcccgacgcaccggtgccagcgcaatttgccggcacc
gacgtgtcggtagcccctccggctgccgctgccactgccgataccggcaacaacgccgac
acggcctatattgccgatatcggctggcgccaggtcttcaccgacccgacgctgcagcag
gtgattgcgctggcactggacaataaccgcgacctgcgcgtggccgcgctcaatatcgag
gtggcacgcgcgcaatatcgggtggaccgcgccgcgttgctgcccgcgatcgatggcacc
ggtaccgccaacaatgcgcgcacgccgtcggagctggccattcccggccagccgcaggtg
ttccgcacctacagcgccaacatcggcatcagtgcctatgagctggacctgttcgggcgc
gtgcgcagcctgaaggaacaggcattgcagcaattcctgtccaccgccgaggcgcgccgc
agtacgcatatcagtctggtggcagaagtggccaccgcctatctgaccttggcggccgac
cagcagttgctgcagctggcgcaatccaccctgactagtcagagcgacagttatcgcctg
cagcagcgcagcttcgaactgggcgtggcctcgcaactgaccttgcgtcaggcgcagacc
acggtggaaaccgcacgcgtggacgtggagcgctacaccgcccaagtggcgcaggatcgc
aacgccctggtgctgctggtcggcacgcaagtgccggtggaattgctgccgcatgcattg
ccggacaacgccagcgtggaaggcaatgtgttggccagcgtgccggccggcttgccgtcg
cagttgctgcaacgtcgccccgacattctggaagccgagcgcaacttgcgtgcggccaac
gccaatatcggggcggcgcgggcggcgttcttccccagcatcagcctgaccgcatcgacc
ggttcgtccagcagtagcctctcgaggttgttcgatgccggcacgcgtgcctggagcttc
gtgcccacgctgaccttgccgatcttcaatgccgggcgcaatcgcgccaatctggacatg
gccaaggccaaccgcgatatcgaagtggcgcgctacgaaaagtcgatccaaagcgcgttc
cgcgaggtctccgacgcgttggcgcagcgcgacacgctgggcaggcaactacaggcccag
caagcgctggtggatgccactgccgatagctaccggctgtcgcaggcgcgtttcgaacgg
ggcatcgacagctatctgcaggcgctggatgcgcagcgttcgctgtacagcgcgcagcag
accttgatcaacacccagctgtcgcgcttcaccaacctggtgacgttctacaaggccatg
ggcggtggctggctgcaaaccgccgcgcccactgccgtcgcgagcccagcagcggagccg
ccgcgtggatga
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