Xanthomonas campestris pv. raphani: XCR_1668
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Entry
XCR_1668 CDS
T01872
Name
(GenBank) outer membrane efflux protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp01501
beta-Lactam resistance
xcp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XCR_1668
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
XCR_1668
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xcp02000
]
XCR_1668
01504 Antimicrobial resistance genes [BR:
xcp01504
]
XCR_1668
Transporters [BR:
xcp02000
]
Other transporters
Pores ion channels [TC:
1
]
XCR_1668
Antimicrobial resistance genes [BR:
xcp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
XCR_1668
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
XCR_1668
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
XCR_1668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AEL06567
LinkDB
All DBs
Position
1699523..1700968
Genome browser
AA seq
481 aa
AA seq
DB search
MTTLALALAACASSRGLAPQGTVLEPGAVHAERTFGQAQLSPAAWPASDWWRALGDPQLD
ALIAEGLQHSPSLAAADARLRQAQARTGTAQADRGPGLSVSGGYAGWQLPESMVGEERGG
SYAGSAQVVLDFRYGVDLWGGKRAAWEAAVDQAHAAEVDAQAARLNLSAAIAEGYAQLAY
ARDLQDVANDELARAQKTLELTQRRRGAGIDSELQVRQAQARVPAAQQQVQSAQQQIDEA
RNALAALVGQGPDRGLDIARPVLSQSLPPQLPSALPADLLGRRPDVVAARWRVEAADKDI
AVAKARFYPSLNLTALGGVINSDVGKLLESGSVLGVVAPALSLPIFDGGRLRAGLAGSDA
QYDLAVADYNQKVLDALREVADQVNAVRSLEQRARAQDDAVQTASAAFGLAQQRYRAGIG
SYLEVLSVQEQLLTARQRMAGLHSQQLMASVKLRRALGGGFTPEPAHDTAHTATSSAQPH
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacgctggcactggcgctggccgcctgtgccagcagccgcggcctggcgccgcaa
ggcaccgtgctggagcccggcgccgtgcatgccgagcgcaccttcgggcaggcgcagctg
agcccggccgcctggccggccagtgactggtggcgcgctttgggcgacccgcagctggac
gcgctgatcgccgaaggcctgcagcacagccccagcctggccgctgccgatgcacggctg
cgccaggcgcaggcgcgcaccggcactgcccaggccgatcgcggccccggcctgtcggtt
tccggcggctacgccggctggcaattgcccgaatcgatggtgggcgaggagcgcggcggc
agctatgccggcagcgcgcaggtggtgctggacttccgctatggcgtggacctgtggggc
ggcaagcgcgccgcgtgggaagcagccgtggaccaggcgcatgccgccgaggtggacgcg
caggcggcacgcctcaacctgtcggcggccatcgccgaaggctacgcacagctcgcctac
gccagggatctgcaggacgtggccaacgatgagctggcacgtgcgcagaaaaccctggag
ttgacccagcgccgccgcggcgccggcatcgacagcgaattgcaggtgcgtcaggcgcag
gcccgcgtgcccgccgcgcagcagcaggtgcaatcggcgcagcagcagatcgacgaagca
cgcaatgccctggccgcgctggtcgggcagggcccggaccgcgggctggacatcgcgcgc
ccggtgctgagccagagcctgccgccgcaactgcccagcgccttgccagccgatctgctc
ggccgtcgccccgatgtggtggcggcgcgctggcgcgtggaagcggctgacaaggacatt
gccgtcgccaaggcgcgcttctatcccagcctcaacctcaccgcgctgggcggggtgatc
aactccgatgtcggcaagctgctggaaagcggctcggtcctcggtgtggtggccccggcc
ttgagcctgcccatcttcgatggcggccggctgcgcgccggcttggccggcagcgatgcg
cagtacgacctggcggtggccgattacaaccagaaggtgctcgacgccctgcgtgaagtg
gccgaccaggtcaacgcggtgcgctcgctggagcagcgtgcacgcgcacaggacgacgcc
gtgcagaccgccagcgccgcctttggcctggcccagcagcgctaccgcgccggcatcggc
agctatctggaagtgctgagcgtgcaggagcaattgctcaccgcgcgccagcgcatggcc
gggctgcactcccaacaactcatggcctcggtgaagttgcgccgtgcgctgggcggcggc
tttacgccggaaccagcgcacgacaccgcacacaccgcgacctcttccgcacaaccgcat
tcctga
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