Xanthomonas dyei: NYR95_18240
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Entry
NYR95_18240 CDS
T09460
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
xdy
Xanthomonas dyei
Pathway
xdy01501
beta-Lactam resistance
xdy01503
Cationic antimicrobial peptide (CAMP) resistance
xdy02020
Two-component system
xdy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NYR95_18240
09132 Signal transduction
02020 Two-component system
NYR95_18240
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NYR95_18240
01503 Cationic antimicrobial peptide (CAMP) resistance
NYR95_18240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xdy02000
]
NYR95_18240
02044 Secretion system [BR:
xdy02044
]
NYR95_18240
01504 Antimicrobial resistance genes [BR:
xdy01504
]
NYR95_18240
Transporters [BR:
xdy02000
]
Other transporters
Pores ion channels [TC:
1
]
NYR95_18240
Secretion system [BR:
xdy02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NYR95_18240
RTX toxin transporter
NYR95_18240
Multiple protein transporter
NYR95_18240
RaxAB-RaxC type I secretion system protein
NYR95_18240
Antimicrobial resistance genes [BR:
xdy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NYR95_18240
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
NYR95_18240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WOB53254
LinkDB
All DBs
Position
4203349..4204731
Genome browser
AA seq
460 aa
AA seq
DB search
MIRRSLALALAAALSPMAAHATDLLQVYEMARNGDPQLAVAESTRLVNREGQVQARAALL
PQLDGSAGFTQSHRELEGVPGRSTTKQRQYAIQGSQTIFNWAQFANVRAQRDVAKAADFT
LESANNDLITRTSAAYFQVLVGIESLAAAETNEAAAKKQFDYADKRLEVGLAPITDVHEA
RAQYDQARADTINARNTLKDYYQALTELTGQPVVGLRALPEDFRPEVPAAYSNVDQLVST
AIADNPALKAQQLQVSAAEAQVNAARAGHYPTLNLSGSMGRTNSWGGGSEIDTTAGNFTT
DNRNIDTDSIGITLSIPIFAGGATQSAVRQALSRRDIQQDTYEQQKRALDRNTRNAYQTV
VAGISEVEARRLAVVSAQAAYDASQVGLEVGTRTVLDVVQNQRTLFQAQLNYAQSRYTFL
QNRLLLGQAIGKLDITDLQDVNRLLSQDAEAKLQGSGSLQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgatccgccgatccctcgccctggccctggccgccgccctgtcaccgatggccgcgcac
gccaccgacctgctgcaggtctacgaaatggcccgcaacggcgacccgcagctggccgtg
gccgagtccacgcggctggtgaatcgggagggacaggtgcaggcgcgtgcggcgttgttg
ccgcagctggacggctcggccggtttcacccaatcgcatcgcgaattggaaggcgtccca
ggtcgctccacgaccaaacaacgccagtacgcgatccagggtagccagaccattttcaac
tgggcgcagttcgccaatgttcgtgcgcaacgcgacgtcgccaaggcggcagatttcacc
ctggaatcggcgaacaacgacctgatcacgcgcacttcagctgcatacttccaggtcttg
gtgggcatcgagtctctggccgcagcagaaaccaatgaagcagccgccaagaagcagttc
gactacgccgacaagcgtctggaagtgggcctagcaccgatcaccgacgtacacgaggca
cgtgcccagtacgaccaagcgcgtgccgacaccatcaacgcacgtaataccttgaaggat
tactatcaggcattgaccgaactcaccggtcaaccggtggtcggcctgcgcgcactgccg
gaagacttccgcccggaagtcccggcggcttacagcaatgtcgatcagctggtgtccacc
gccatcgccgacaacccggcgttgaaggcgcagcagctgcaggtcagtgcagccgaggca
caggtcaatgccgcgcgtgctggccattacccgacgctcaatctgtcaggcagcatgggc
cgcaccaatagctggggcggaggcagcgaaatcgatacgacggcaggaaacttcacgacc
gacaatcgcaatatcgacactgattcgatcggcatcaccttgtcgatcccgatcttcgct
ggcggcgcaacgcagtcggccgtgcgtcaggcgctatcgcgtcgcgatatccagcaggac
acctacgagcagcagaagcgcgcgttggaccgcaatacgcgcaatgcctatcagaccgtg
gtggccggtatcagcgaagtagaagcgcgtcggcttgcagtggtttccgcgcaggccgcc
tacgatgcctcgcaggttggcctggaagtcggtacgcggaccgtgctggacgtggtgcag
aaccagcgcaccttgttccaggcgcagttgaactacgcgcagtcgcgctacaccttcctg
cagaatcgcctgctgctcggccaggccatcggcaagctcgacatcaccgacctgcaggat
gtgaatcgcctgctgtcgcaggatgccgaagccaagctgcagggcagcggctcgctgcag
taa
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