Xiphias gladius (swordfish): 120784244
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Entry
120784244 CDS
T07311
Symbol
adar
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04622
RIG-I-like receptor signaling pathway
xgl04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
120784244 (adar)
04623 Cytosolic DNA-sensing pathway
120784244 (adar)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xgl03041
]
120784244 (adar)
Enzymes [BR:
xgl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
120784244 (adar)
Spliceosome [BR:
xgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120784244 (adar)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
Motif
Other DBs
NCBI-GeneID:
120784244
NCBI-ProteinID:
XP_039973793
LinkDB
All DBs
Position
LG22:17595796..17610861
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AA seq
1388 aa
AA seq
DB search
MSRGRGGPSKEHYHINPPTHLQAKENYNRPGPAQLYPRAGPQQIPYSSYYNSPAPPVVSI
QPPAPSFISSAPPTQSHNKAAPKPVPLINSHNQNHSPSPHPNLFQYQQAEFLRGHSSEAP
QFRASPRGGGGGVVPGRPPSSSYQPHSGYGRYPNTNSSPRCRGGYSQDQGFAYPPTVAPP
RGPQGPRYPNQDQLQGKNHNQYSNRQWCAQTDIWCDSFQSLSLHRDRPIRGERFDRHSAS
SSLAISSSSKVNITLTPDIQEQVHRALAALKPSESISAKLLAKRLRLPKKIVNKALYSLE
RSQKASKQGLLPPEWTVYREPLRFCKEDQNSKVQSSPSHLCDRSEHPQKPEAKVELKTET
ARYSGQAKEEDSDTESSSSYCSSLESSDSEESQSPAKGKHEDKQNPGTTSSPDREPQLPT
MADQKELVMQYLLESREATALVIAKNLGFKNAKHVNPTLYALEKQGEVIKNGEVNPPTWE
LSSRRRERMERSLKAAQSTSAEGCQMEVEASRETKGGGSILLTSPALPPIPGLEPQTLPD
KWNVEQSHSETSRSSPQPPSFTSCKDKETSEGQWATDDIPEFLNAIRRETDAEKLAAEKA
NTMGTVAVSLAAPPPQNLWAKLQEVRLKNPVSGLMEYAQYLGQNCEFLLLDQSGPSHDPR
FRMQVMLNGRLFPVAEASSKKVAKKDAAAATLRILIGEMQGGASTGDDGNTASTDQVMDL
LPDASRAAESMGGIFGSGNVEEVGVVEGPRQPLSRSLPGGKNPVSVLMEYSQRSGNPIEF
IITGQAGPPHDPRFMYRVKVGESLFPEASAPSKKAARQLAAEEAVKELMAEGRLQLNKPQ
LPLGSSSDSDGGGAGTTCPSLPPLTADELRAAHEAGVGDLINHLNNNAVSGLLEYARARG
FAAEIRLVGQSGPPHEPKFTYQAKLGGRWFPPVCASNKKQGKQEAADAALRVLIGEAERA
ARTGELIPAELPVSGSTLHDQIAMLSHQRFNALTTRIQHSLLGRKILATIVMRRGEGLGT
VVSLGTGNRCVKGEELSLKGETVNDCHAEIISRRGFVRFLYSELLKHYDGADDSIFEPVE
KNKLRVKSDITFHLYISTAPCGDGALFDKSCSEAGDEVEGHQPLFENAKQGKLRTKVENG
EGTIPVESSAIVPTWDGIQHGERLRTMSCSDKILRWNVLGLQGALLTHFLHPIYLKSITL
GYLYSHGHLTRAVCCRLARDGEAFTQSLPLPFMLNHPEVGRVSVYDSTRHTGKTKESSVN
WSFPDQHSVEVLDGTKGKLDGNKLGVSRVSKSNLFCLFHTLCQRCGRTDLLSLPSYAQAK
MSAMSFQLAKQQFFRSLSVHGYGAWIGKPLEEKSFEAGEGTRNNDASVPVGYSSSRNGGA
MEYKQEEV
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggtagaggagggccttccaaagaacactatcacataaatccacctacccac
ctccaggccaaggaaaattacaacagacctggcccagcccaactctaccccagagctggc
ccacagcagatcccatattcaagttactacaacagccctgcccctcccgtggtgtccata
cagccgccagctccctcattcatttcctccgctccacccacacagagccacaataaagca
gcccctaaacctgtgccccttatcaattcacataatcagaatcacagtcccagtcctcat
cccaatttatttcagtaccaacaggcggagttcctgagaggacacagctctgaggctcca
cagttcagagccagtccacgaggagggggagggggagtggtacccggcaggccacccagt
tcctcatatcagccccattcagggtacggtagatatccaaacaccaacagcagccctagg
tgtagaggtgggtatagccaggaccagggttttgcgtatccccccactgtagcacccccg
cgaggccctcagggccctcgatacccgaatcaagaccagttacaaggtaaaaaccacaac
cagtactccaacagacaatggtgcgcccagacagacatttggtgtgatagttttcagagt
ttgtctcttcatcgagaccggcccatcagaggagagaggtttgacagacattctgcatcg
agcagcttagcaatttcaagctctagtaaagttaacatcactctcactcctgacatccag
gagcaggtacacagggctttggctgctttgaagccaagtgagagtatatctgcaaaattg
ttagccaaaagactgcgtctgcccaaaaagatagtgaacaaggccctctactctttggaa
cgttcacagaaagcctccaagcaaggactcctccctcctgagtggactgtatacagagaa
cctctcaggttctgcaaggaagatcaaaactcaaaagtacaaagttccccatcccatctg
tgtgacaggtcagaacaccctcaaaaacctgaagccaaggttgagctaaaaacagaaaca
gcaagatacagcggacaggccaaagaagaggactctgacacagaatccagttcttcttac
tgctcctctttagagtcatctgactctgaagaatcccagtcaccagcaaaaggtaagcac
gaagataaacaaaatcccggcactaccagctcccctgatcgggaacctcagcttcccacg
atggcagaccagaaggagctagttatgcagtacctcctggagtcaagggaggcaactgct
ctcgtcatagccaaaaatcttggttttaagaatgccaagcatgtcaatcccaccctttat
gctttggagaagcaaggtgaagttattaagaatggggaagtcaaccctcccacctgggag
ctctccagccgccgcagagagaggatggagaggagcctcaaagccgcacagagcacctca
gctgagggttgtcagatggaggttgaagccagtagagagacgaagggaggagggtccatt
ctcctgacgtcaccagcactaccaccaataccaggcctcgagccacaaacacttccagac
aaatggaatgtggagcaaagtcacagtgaaacgtccaggtcctcccctcagcccccctcc
tttacctcatgtaaagacaaagagaccagcgaaggacagtgggccactgatgatatccca
gaattcctcaacgctattcgcagagaaacggacgctgaaaaactggcagcggagaaggcc
aacaccatgggaactgttgctgtgtcactggctgccccacctccccagaacctgtgggcc
aaattacaggaggtgaggctgaagaaccccgtcagcggcctcatggagtatgcccagtat
ctgggccagaactgcgagttcctgctgcttgaccagtcagggccctcccacgaccccaga
ttccgtatgcaagtgatgctcaacggcaggctgtttcctgtcgcagaagcttccagtaag
aaggttgcaaaaaaggatgcggctgcggccaccctgcgcattctcatcggggagatgcag
ggaggagcgagcacaggggacgatggcaatactgccagtacggaccaagtcatggatcta
ctcccagacgccagtcgggcagctgaaagcatggggggaatttttgggtcgggtaacgtg
gaagaggtaggggtggtggagggacctcgccagcccctgtcccgctctctgcctggtggg
aaaaatccggtgtctgtcctgatggagtacagccagcgcagcgggaaccctatcgaattc
atcatcactgggcaggcaggcccaccacatgacccaaggttcatgtacagggtgaaggtc
ggagagagcctgtttcctgaggcctcagctccaagcaagaaggcagcacgccagctggca
gcagaggaagctgtcaaagaattaatggctgaagggagattgcagctcaacaagcctcag
ttgcccctaggctcttccagtgatagtgatggtggtggtgctgggactacatgtccctct
ttgccccctctgactgcagacgaattgcgagcagcacatgaggcaggcgttggcgacctt
atcaaccacctgaacaacaacgcagtgtcaggtcttctggagtacgccagagcccggggc
tttgctgctgagatccgcctggtggggcagtctgggccaccgcatgagcctaagttcacc
taccaggctaagctgggcggacggtggtttcctccagtctgtgcgtccaacaagaagcag
ggaaaacaggaagcagcagatgcggctctacgggttttgattggagaagctgagagggca
gctcgcactggggagcttatcccggctgagcttccagtgagtggcagcactttgcatgac
cagatagcaatgttgagtcaccagcgtttcaacgccttgaccacacgtatccagcatagc
cttctgggacgcaagattctggccaccatcgtcatgaggaggggggagggcctggggact
gttgtcagcctgggaactggaaaccgctgtgttaaaggggaggagctgagccttaaaggg
gagactgttaatgattgtcacgctgaaatcatctccagaaggggatttgttcggtttctg
tacagtgagctgctcaagcactacgatggcgcagacgacagtatatttgagccagtggag
aaaaacaaactgcgggtcaaatctgacatcacctttcacctctacatcagcacggcacct
tgcggagatggggctctttttgataagtcctgcagtgaggctggggatgaagttgagggc
caccagcctctgtttgagaatgctaagcagggcaagctacgcaccaaagttgagaacggt
gagggcaccatcccagtggagtcaagtgccattgtgcccacctgggatggcatccagcac
ggggagaggctgcgaaccatgagctgcagtgataagatcctgcgctggaatgtgctgggc
ctgcagggggcgttgctcacccatttcctgcatcccatctacctgaagtccatcacactt
ggctatctgtacagccacggtcacctgacacgtgctgtttgctgtcggctggccagagat
ggtgaagcattcacccagagtcttcctcttcccttcatgctaaaccacccagaggtgggc
agggtgagtgtgtacgactccacacgtcacacgggcaagaccaaggaatccagtgtgaac
tggagctttccagaccagcacagtgtagaggtgttggacgggaccaaaggcaaactggat
gggaacaaactgggcgtttcccgtgtgtccaagtccaacttattctgtctgttccacact
ctgtgccagcgatgtggccgcacagatctcctctcgctgccctcctacgcccaggccaag
atgtcagcaatgtccttccagctagccaagcagcagttcttccgctctctcagcgtccac
ggctacggtgcctggatcggcaaaccgctggaagagaagagctttgaggcaggggaggga
accaggaacaatgacgcaagtgtccctgtgggatacagcagcagtagaaacggaggagcg
atggagtacaagcaagaggaagtgtag
DBGET
integrated database retrieval system
