Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00320
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Entry
AMD24_00320 CDS
T04108
Symbol
citZ
Name
(GenBank) Citrate synthase 2
KO
K01659
2-methylcitrate synthase [EC:
2.3.3.5
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00020
Citrate cycle (TCA cycle)
xii00630
Glyoxylate and dicarboxylate metabolism
xii00640
Propanoate metabolism
xii01100
Metabolic pathways
xii01110
Biosynthesis of secondary metabolites
xii01120
Microbial metabolism in diverse environments
xii01200
Carbon metabolism
xii01210
2-Oxocarboxylic acid metabolism
xii01230
Biosynthesis of amino acids
Module
xii_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xii_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AMD24_00320 (citZ)
00630 Glyoxylate and dicarboxylate metabolism
AMD24_00320 (citZ)
00640 Propanoate metabolism
AMD24_00320 (citZ)
Enzymes [BR:
xii01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.5 2-methylcitrate synthase
AMD24_00320 (citZ)
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
Motif
Other DBs
NCBI-ProteinID:
ALJ56502
UniProt:
A0A0P0G3R4
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All DBs
Position
complement(334742..335866)
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AA seq
374 aa
AA seq
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MTITTAKGLEGIVANSTTISDVLGEKGILIYAGYDINELAGKVSYEEVVYLLWHGRLPDQ
NELNHLKADLSHCRRLPEGVLSFIMGAPKDANPMDILRTGISMMGLYDRVKKGGAEADQK
RAIDITAAVAIIAAYFHRARQGKSLPPIREDLGEAAHFLYLLNAEEPSAEVVNALDLAYV
LHADHGMNASTFSARVTISTLSDIYSAITSAIGTLKGPLHGGANEGVIHMLLEIESLDRV
DDWVGERLAQKKKIMGIGHRVYRTLDPRAPHLRQMALKLCNRLGEKKWIQMSERIAAIMK
AKKGLHANVDFYSATVYYSLGIPTDMFTPVFTIARTAGWTAHILEQLADNRLYRPLSEYT
GPVPGKKVKPIGQR
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtgacaattactactgccaaagggctagaggggatcgttgcaaacagcaccaccattagt
gatgtgttgggagaaaaaggaattctgatctatgctgggtatgatatcaacgaactggcc
ggtaaagtcagttatgaagaggtggtatatttgctctggcacgggagattacctgaccaa
aatgaacttaatcacctcaaggctgatttgagccattgccgcaggttacctgaaggagtg
ctgagttttattatgggagcaccgaaagacgctaatcccatggatatactccgtacaggc
atatcaatgatggggctctatgacagggtgaagaagggtggtgccgaagctgatcagaag
cgggctattgatatcacagctgcggtagcaattatagccgcttactttcaccgtgcccgc
caaggcaaaagtctgcctccaattcgtgaagaccttggagaggctgcccactttctttat
ttactcaatgcagaggagccctcagctgaggtagtaaatgcattagatctcgcctacgtg
ctccatgccgatcacggtatgaacgcttctactttctctgcacgcgttaccatttctacc
ttgagtgatatttactctgctattacttccgctattggtactctcaagggacctctccac
ggcggagctaatgagggtgtcattcacatgctcctcgaaatcgagagtctagatcgggtg
gatgattgggtcggggagcgtcttgctcaaaaaaagaaaattatgggtattggccaccgt
gtttaccgtacattagatcctcgtgctccacatctacggcaaatggctcttaagctttgt
aataggctgggcgagaagaagtggatccaaatgtctgaacgcattgctgctatcatgaag
gcaaagaaaggccttcatgctaacgttgatttttattcggctacggtctattactccctg
ggcattccaaccgatatgttcactcctgtcttcaccatcgcacgcacggctggatggacg
gctcacatcctggagcagctcgcggataatcggctctatcggccgctaagcgagtatacc
ggaccagttcctgggaaaaaggtaaagcctatcgggcagcgctaa
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