Xenopus tropicalis (tropical clawed frog): 100493195
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Entry
100493195 CDS
T01011
Symbol
adar
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase isoform X1
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04622
RIG-I-like receptor signaling pathway
xtr04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
100493195 (adar)
04623 Cytosolic DNA-sensing pathway
100493195 (adar)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
100493195 (adar)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
100493195 (adar)
Spliceosome [BR:
xtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100493195 (adar)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
100493195
NCBI-ProteinID:
XP_031746878
Xenbase:
XB-GENE-854473
UniProt:
A0A8J1IMT7
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Position
8:142269582..142291903
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AA seq
1218 aa
AA seq
DB search
MKTLPSPHHIFRAPVRNHCALRHCRRQSPLVSPSALRMRTWLRPHPLCVTVLWAGEFFFL
FCSGSGSSPAGSSGVCGQRKRSCRGCAAATTGSEYQPQSLREQQRNFLLGYTSAPHIPAA
AWHTYRTPPKDFYPPRHTRQRPLLQTPPAPPRFSNRGPPAHIYGLAQAFGSLSVSRDPVE
SRLLDYIRGLSDGQTFTAKELAWRFKVAKKCINHFLYRFEGKGLLCKSLGTPPVWRVSSA
THPPPSQSSGSSSYQGSSSPAEGLSTSDSEDNSVPCSPEVMAANKEKVCDFLYNSQPSTP
FIIRKNVGIPKMPELTQILNALEKQGEACKVSSNPVKWTLTDKKRERMLIKKRAAEIHAM
EVKLEGVSEAKEPETPAERELENGQQAASMLEAVHTELPVGPVPGDGFIADQNVPPFEAS
EEPPRKRAKGGSEFDDFENGKWASDDIPEAMNAMNAMNQSDVLVGIPEAEIHNEFTQAYE
PVKEFNRLEKLLACREKNPVSGLLEFTHYCSQHCDFVLLNQSGPSHDPRFKIQAVIDGRS
FPVAEASSKKTAKKDAAALALRILLREEQGGTEEEVMAEGAQLPDVKEEVGASRGGAGGL
HTIQTFVPLQTLPLKVPAQPFFPSTKNPISILMEHGQKSGSMCEFQLVSQEGPPHDPKFT
YTVRIGNQTFPPVVANSKKMAKQLAAEAAVRELLGDSVLLPDKLEPSFHPNPTEFPAVPE
LSVEDLKMAQASSVGDLIKYLNANPVSGLLEYARAKGFAAEFKMVNQTGPPHDPKFVFQA
KVGGRWFPAVSASNKKQAKAEAADAALRVLIGEAERAAREGDVMTELPVSGSTFHDQIAM
LSHQKFNSLTARIQNSLLGRKILAAIIMKKSSDDLGTVVSIGTGNRCVKGEELSLRGETV
NDCHAEIVSRRGFIRFLYSQLMKYNPDMPDDSIFEEAEGDLLRVRPGVTFHLYISTAPCG
DGALFDKSCSDQPSADGDTKHCPIFENVKQGKLRTKVENGEGTIPVESSDIVPTWDGIQH
GERLRTMSCSDKILRWNVLGLQGGLLTHFMEPVYLSSLTLGYLFSQGHLTRAICCRMSRD
GDAFQNQLPDLFVVNHPEVGRVSVYDSTRQTGKTKESSVNWCLADEEVEVLDGTKGKVEG
VKLEISRVSKLHMFTLFQQLSVLRGRHDLLALGSYSDVKATAATYQTAKGQLFRALQEMG
YGNWISKPQEEKCFSLSI
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactttgccctcccctcaccatatcttccgtgctcctgtgagaaaccactgtgca
cttcgccactgccgccgccagagcccgctagtgagcccgtccgctctgcgcatgcgtact
tggctgcgcccccatcctctgtgtgtgacggtcctctgggcgggagaatttttttttctt
ttttgctccggaagcggaagttcaccggccggaagcagtggcgtgtgtggacaaagaaag
aggagctgcaggggctgtgccgccgccaccacgggatcggaataccagcctcaaagtctc
cgtgagcagcagagaaacttcctcttgggatacacgtcagcgcctcacatccccgctgct
gcttggcacacataccgcaccccaccgaaagacttctacccgccccgacatacccggcag
cgccccttattgcaaacccctcctgcgccgccacgcttcagcaaccggggaccccctgcc
catatctacggtctggcccaagctttcggatcactgtcggtctctcgtgatcctgtagaa
agccgtctattggattacatccgggggctaagtgacggccagactttcacggcaaaagag
ttagcttggcgctttaaggtcgcaaagaagtgcatcaaccattttctatacagatttgag
ggaaagggtttgctctgcaagagtcttgggacgccgccagtgtggagagtctcttccgcc
actcatcctcccccgtctcaaagcagcggcagcagcagctatcagggcagctcatctccg
gccgaagggttgtccacctccgattctgaagacaattcggtcccctgttcccccgaagtc
atggcggcaaacaaggaaaaagtctgtgacttcctgtacaattctcagccatctacgccc
ttcatcatccgcaagaacgtcgggatccctaaaatgcccgaactcacccagatcctaaac
gctctcgaaaaacaaggcgaggcctgcaaggtgagctcgaacccggtaaaatggactctc
accgacaagaaacgtgagaggatgctgattaaaaaaagggcggccgaaatccacgcgatg
gaggtgaaattggaaggagtgtcggaagccaaggagccggagacacctgccgagagggaa
ctcgaaaacggccaacaagccgcctcgatgcttgaagctgtccatacggagctccccgtg
gggccagtcccaggggacgggtttatcgctgaccaaaatgtgccccccttcgaggcatct
gaggaacctccgaggaagcgggcgaaggggggaagtgagtttgatgactttgagaacgga
aagtgggcctccgacgatatccccgaagctatgaacgccatgaatgccatgaatcaatcc
gacgttctggtaggaattccggaggccgagatccacaatgaattcacacaggcttacgaa
cccgtcaaagaattcaaccggctagagaagctgctggcgtgccgagagaagaaccccgtg
agtggcctcctggagtttacccactactgctcccagcattgtgactttgtcctcctcaac
cagagcgggccctcccatgacccccggttcaaaatccaggcagtgatcgacgggcgcagt
ttcccggtggcggaagccagcagcaaaaagacggccaaaaaagatgcagcggctctggct
ctccgtatactcctgcgcgaggagcagggcgggacggaagaggaggtcatggcagagggc
gcacaacttccagacgttaaagaagaggtgggtgcttcacgtgggggtgccgggggcctt
cacaccattcagacatttgtgccattacaaaccctgccgctgaaagttccggcacagcca
tttttccccagcaccaaaaatcccatcagcattctcatggagcacgggcagaagtctggc
agtatgtgcgagttccagctcgtgtctcaagaaggacctccccatgacccgaagttcact
tatactgtaaggattggaaaccagaccttccctcctgtagtggctaacagcaagaagatg
gccaaacagctagccgccgaggctgctgtgagggagctcctgggagacagcgtgctgctg
cctgacaagttggagcccagtttccatcccaacccaacagagttccctgcagtccccgaa
ctctctgtggaagatctgaaaatggcccaggcgtccagcgtcggggacttgatcaaatat
ctcaatgccaacccggtcagtggccttctggagtacgctcgtgccaaggggtttgccgct
gagtttaaaatggtcaaccaaactggacccccccatgaccccaagtttgtgtttcaagca
aaggtcggcggtcgctggttcccagctgtcagcgcctctaacaagaaacaggccaaggca
gaagctgccgacgcggcactgagggtcctaatcggcgaagcggaaagggcggctcgggaa
ggggacgtcatgacggagctcccggtgagcggaagtactttccacgaccagattgccatg
cttagtcaccagaagttcaacagccttacagcccgaatccagaacagtctgctgggcaga
aagatcctagctgctattatcatgaagaagagcagtgatgacttgggcaccgtggtcagc
atcggcactgggaaccgctgtgtgaagggagaagaactgagcctgagaggagagacggtt
aatgattgccacgcagagattgtgtctcgtcggggatttataaggtttctgtacagccag
ctgatgaagtacaacccggacatgccagatgacagtatatttgaagaagccgagggggat
ttattaagggtccggcccggtgtgacctttcacctgtatataagtactgctccctgtggc
gatggggcgctgtttgacaagtcctgtagtgaccagccttctgcagacggagacaccaag
cactgtcccatttttgagaatgtgaagcagggcaagctgcgaactaaagtggaaaatgga
gagggcactattcccgttgagtccagcgatattgttcctacctgggatgggattcagcac
ggggagaggctccgcaccatgtcttgcagtgataagatcctgcgctggaatgtactgggc
ctgcagggagggctccttacacattttatggagcccgtgtacctcagctctctaacactc
ggttatctgttcagtcaggggcacctcacgcgtgctatctgctgccgtatgtcccgggac
ggagacgccttccagaaccaactaccggacctttttgtcgtcaaccacccagaggtggga
cgggtcagcgtgtacgactccacgcggcagacggggaagactaaagagtccagcgtgaac
tggtgtctggcagacgaggaagttgaagtgctggatggaaccaagggcaaggttgaggga
gtgaaactggagatctcccgcgtgtccaaactgcacatgttcaccctgttccaacaactc
tccgtcctacgcgggcgccacgacctgctggcgctcggcagctacagcgacgtcaaggcg
acggccgccacttaccaaaccgccaagggacagttgttcagggcgctgcaggagatgggt
tacggtaactggatcagcaaaccgcaggaggagaaatgcttctccctctccatttaa
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integrated database retrieval system
