Yersinia rochesterensis: CH54_2070
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Entry
CH54_2070 CDS
T03609
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K22015
formate dehydrogenase (hydrogenase) / hydrogen-dependent carbon dioxide reductase [EC:
1.17.98.4
1.17.98.5
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr00680
Methane metabolism
ykr00720
Other carbon fixation pathways
ykr01100
Metabolic pathways
ykr01120
Microbial metabolism in diverse environments
ykr01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
CH54_2070
00680 Methane metabolism
CH54_2070
Enzymes [BR:
ykr01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.4 formate dehydrogenase (hydrogenase)
CH54_2070
1.17.98.5 hydrogen-dependent carbon dioxide reductase
CH54_2070
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Gene cluster
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Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
NADHdh-2_N
Motif
Other DBs
NCBI-ProteinID:
AJJ35993
LinkDB
All DBs
Position
complement(2267054..2269201)
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AA seq
715 aa
AA seq
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MDKILTVCPYCGSGCKLNLLVEGGEIVGAQPANGVTNQGELCLKGYYGWDFLNDTRLLTP
RLTAPLLRRQRGEAFQRVSWQEAIAFITAKLKTIKKESGPDAIMMTGSSRGPGNEANYVM
QKFARAAIGTNNIDCCARLCHGPSVAGLQQTLGNGAMSNSIGEIENTDCVLVFGYNAADS
HPIVARRILKAKSKGAKLIVCDPRHIETARIADQWLPLNNGANMALVNAFIYVLIEEKLY
DDNYVRAHTRGFEELKAGVADYRPEAVEQITGLPASAVRLAMRTYAAAPAATILWGMGVT
QWGQAVDVVKGLSSLALLTGNLGRPNVGVGPVRGQNNVQGACDMGVLPNTFPGYEKVTDD
AARGRFAAAWGVPELPAHVGYSITDVPHKVADGKLKAYYVFGEDPIQTEPDLAAMRAAFA
ALELVVVQDIFMTKTAELADVVLPATSWGEHEGVYTSADRGFQHFNKAIEPKGDVKPDWE
IISLISTAMGYPMAYQNTQQIWDEMRNLCPPFYGATYEKMAGLGYVQWPCPSEDHPGTPY
LYTDSQFATEDGKGVLSCAPWQPPHEQTDRDYPLALCTVREVGHYSCRSMTGNCATLKIL
ADEPGYVQIHPDDASQLGVIDQALIWISSRRGKVIARASVTERANRGAVYMTYQWWIGAC
NELTVDHVDPVSKTPEFKHCAVKVEAIGDQSAAEQYVEQQYHLLKKRLLDAAMVQ
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatcctcacggtctgcccctattgtggctccggatgtaaattgaatttattg
gttgaaggcggcgaaattgttggcgcacagcccgccaatggcgttactaatcaaggcgag
ttgtgcttgaagggctactatggctgggattttctcaatgatacccgcctgctaacccca
cggctgacagcccccttattgcgccgtcagcggggcgaggcgtttcagcgcgtgagctgg
caagaagccattgctttcatcacggctaaactgaaaaccatcaaaaaagagagtgggcca
gatgccatcatgatgactggctcctcccgagggccggggaatgaggccaattatgtgatg
caaaagtttgcccgcgccgccatcggcaccaacaatatcgactgctgcgcccgcttatgt
cacggcccctcggtggcgggattgcagcaaacgctgggtaatggcgcgatgagcaactcc
atcggcgaaatcgaaaatactgactgcgtattggtctttggctataacgccgccgactct
cacccgatcgtcgcacggcggatcttaaaggccaaaagcaagggggcgaaactgatcgtc
tgtgatccacggcacattgaaaccgcccgcattgccgatcaatggctaccgctgaacaat
ggcgcgaatatggctttggtaaatgccttcatttacgtgctgattgaagagaaactctac
gacgataattatgttcgtgcccatactcgcggctttgaggagctgaaagcgggcgtggcg
gattaccgcccagaggcggtcgagcagatcaccggattacctgcatcagcggttcgtctg
gcgatgcgcacctatgccgccgccccggctgccaccattttatggggcatgggggtgaca
caatgggggcaggcggtggatgtggtgaaagggctatcttcgctggcgctattaactggc
aatctcgggcggcccaatgtgggtgtcgggccggtgcgcggccagaataatgtgcagggg
gcctgtgatatgggcgtcttgcccaataccttccccggttatgagaaagtcactgacgat
gcggccagagggcgttttgcggcggcttggggggtgcctgagttgcccgcccatgtgggc
tactcgattaccgatgtcccccataaagtggcggatggcaagctgaaagcctattacgtc
tttggcgaagatccaattcagactgagccggatttggccgccatgcgcgccgcttttgcg
gcattagaactggtggtggtgcaggatatttttatgaccaaaaccgccgagttggcagat
gtggtgctgcccgcgacatcgtggggcgagcatgaaggggtctataccagcgcggatcgt
ggtttccagcactttaacaaagccattgaaccgaaaggggatgtgaagccggattgggag
ataatcagtctcatctccacggcgatgggctatccgatggcttaccagaatacccagcaa
atctgggatgagatgcgcaacctgtgcccgccattttatggcgcgacctacgaaaaaatg
gccggtttgggctatgtacaatggccctgtccgagtgaggatcaccccggcacgccttat
ctctatactgatagccagtttgcgaccgaggatggcaaaggtgtgctgagctgtgcgcca
tggcagccgccccatgagcagactgaccgcgattatccgctggcactctgtaccgtgcgc
gaagtggggcactatagctgccgctccatgaccggtaactgcgccaccctgaaaattttg
gctgatgagccgggttatgttcagattcaccctgatgatgccagtcagttaggtgttatt
gatcaagcacttatctggatttcttcccgacgcggcaaggtgattgcgcgcgccagtgtg
acggagagggctaatcgcggcgcagtgtacatgacctatcagtggtggattggtgcctgt
aatgagctgacggtggatcatgttgatccggtgtcaaaaacaccggaattcaaacactgt
gcggtcaaggtggaggctatcggcgatcaaagtgcggccgagcagtatgtcgagcagcaa
tatcacctgctgaaaaaacggctactcgatgcggcgatggtccagtaa
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