Yersinia rochesterensis: CH54_3121
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Entry
CH54_3121 CDS
T03609
Name
(GenBank) type I secretion outer membrane, TolC family protein
KO
K12340
outer membrane protein
Organism
ykr
Yersinia rochesterensis
Pathway
ykr01501
beta-Lactam resistance
ykr01503
Cationic antimicrobial peptide (CAMP) resistance
ykr02020
Two-component system
ykr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CH54_3121
09132 Signal transduction
02020 Two-component system
CH54_3121
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CH54_3121
01503 Cationic antimicrobial peptide (CAMP) resistance
CH54_3121
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ykr02000
]
CH54_3121
02044 Secretion system [BR:
ykr02044
]
CH54_3121
01504 Antimicrobial resistance genes [BR:
ykr01504
]
CH54_3121
Transporters [BR:
ykr02000
]
Other transporters
Pores ion channels [TC:
1
]
CH54_3121
Secretion system [BR:
ykr02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
CH54_3121
RTX toxin transporter
CH54_3121
Multiple protein transporter
CH54_3121
RaxAB-RaxC type I secretion system protein
CH54_3121
Antimicrobial resistance genes [BR:
ykr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
CH54_3121
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
CH54_3121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
LRR_NXF1-5
Ribosomal_S5_C
Motif
Other DBs
NCBI-ProteinID:
AJJ34431
LinkDB
All DBs
Position
complement(3390139..3391611)
Genome browser
AA seq
490 aa
AA seq
DB search
MKKLLPLLIGLSLAGFSSMSQAENLLQVYKQARDSNPDLRKSAADRDAAYEKINEARSPL
LPQLGLGAGYTHTNGFRDASDSPDSNATSGSLQLTQTIFDMSKWRALTLQEKAAGIQDVT
FQTNEQALILNTATAYFNVLRAIDSLSYTEAQKQSVYRQLDQTTQRFNVGLVAITDVQNA
RASYDTVLAAEVTARNNLDNALENLRQITGVYYPELASLNVSRLKTERPQAVNNLLKEAE
KRNLSLLSARLSQDLAREQIKSAETGYMPTIDLTASTSVTNTRYSGGTPSTQQANMDAGQ
NKIGVQLSLPLYSGGATNSSVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNISASISSI
KAYEQVVISNQSSLDAMEAGYQVGTRTILDVLTATTNLYQSKQQLADARYNYLINQLNIQ
SALGTLNMNDLMALNGVLDKPVPTSATSLAPDDANQNAYADGTSTRATPRATTVSQPASA
AAGNSNPFRN
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaactgctcccccttcttatcgggctgagtctggctggtttcagtagcatgagc
caggcagagaacttgctgcaagtttataagcaagccagggatagtaacccggatttacgc
aaatctgcggctgaccgcgatgctgcatacgaaaaaattaatgaagctcgcagcccgctg
ttaccacagcttggtttaggtgccggttacacccatactaatggtttccgcgatgcctct
gacagcccggatagcaatgcaacatcaggctctctacaactgactcagaccattttcgac
atgtctaaatggcgcgctctgactttacaagagaaagccgccggtattcaggacgtgacg
ttccagaccaatgaacaagctttgatcttgaacacggcaactgcctattttaatgttctc
agagccattgatagcctgtcttatactgaagcgcagaaacaatctgtgtatcgccagtta
gaccaaacgactcagcgttttaatgtcggtttagtggctattactgatgtgcaaaacgcc
cgtgctagctacgataccgtgttagcagcggaagtgacggctcgtaataacctggataac
gcgctggaaaatctgcgtcaaattaccggtgtttattaccctgaactggcgtcgctgaat
gtatctcgcttgaagacagaacgcccacaagcggtaaataatctgttgaaagaagctgaa
aaacgtaacctttctttgctttctgctcgtttgagccaagatttggctcgtgagcagatt
aagtcggcagaaacaggctacatgccaactatcgatttaacggcatcaacttcagtcacc
aatactcgctacagcggcggcactccaagcacccagcaagcaaacatggatgctggtcag
aacaaaattggcgtgcaactgagcttaccgctgtacagcggtggggcgactaattcctca
gtgaaacaggcgcaatacaatttcgtcggggcgagtgagcagttggaaagcgcacaccgt
agtgtggtgcaaactgtacgctcctcatttaataatatttcagcctccatcagcagcatt
aaggcttatgagcaagtggttatttctaaccaaagctcattagatgcaatggaagcaggt
tatcaagtaggaacgcgtaccattcttgatgtattgactgcgacgactaacctgtatcaa
tccaagcagcaattggccgatgctcgttataactacctgataaaccaactaaatatccag
tcagcactgggtacattgaacatgaacgatctgatggccctgaatggtgtactggataaa
cccgtcccaacatcagccaccagcttggcaccggatgatgctaaccagaatgcttatgcc
gatggcaccagcactcgagctacaccgcgtgcgacaactgttagccagccggccagcgcc
gctgctggtaacagcaacccattccgtaactga
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