Yersinia rochesterensis: CH54_3256
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Entry
CH54_3256 CDS
T03609
Name
(GenBank) outer membrane efflux family protein
KO
K12340
outer membrane protein
Organism
ykr
Yersinia rochesterensis
Pathway
ykr01501
beta-Lactam resistance
ykr01503
Cationic antimicrobial peptide (CAMP) resistance
ykr02020
Two-component system
ykr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CH54_3256
09132 Signal transduction
02020 Two-component system
CH54_3256
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CH54_3256
01503 Cationic antimicrobial peptide (CAMP) resistance
CH54_3256
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ykr02000
]
CH54_3256
02044 Secretion system [BR:
ykr02044
]
CH54_3256
01504 Antimicrobial resistance genes [BR:
ykr01504
]
CH54_3256
Transporters [BR:
ykr02000
]
Other transporters
Pores ion channels [TC:
1
]
CH54_3256
Secretion system [BR:
ykr02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
CH54_3256
RTX toxin transporter
CH54_3256
Multiple protein transporter
CH54_3256
RaxAB-RaxC type I secretion system protein
CH54_3256
Antimicrobial resistance genes [BR:
ykr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
CH54_3256
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
CH54_3256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AJJ37922
LinkDB
All DBs
Position
3554564..3556084
Genome browser
AA seq
506 aa
AA seq
DB search
MMTHVVLTARIVKISLTGSVLSLSMLIAGCATDRLDLAPASYTEPWSPDANASVGSGNFS
VPPNPLVAELAPPPTIKSDRAYSLPELIDIAQSQNPDTRIAWQQARQAALAVGMGEAIFL
PIISASVIGGYQSTTTPLPYAIGGDKDLKTSGSAVVPALALQWLIFDFGQRSALLDAAKQ
TSYAANVTFNGMHQKLIYDVTRSYFQYGVAQTQRQIAEQTLKNSLKIQDAAEERRKNGVA
TTVEVALAQQQVAQSELRRVMAKGTERDAYQALLGAMGVSPSLDIKVGYAEDRALPKGIS
APTEKMIRLALSQRPDVLASYAAVEAAKAGIKATEADFLPKVYLAGAVAGGDGRFDIQGL
PGISQQTSSSSILVGVSVPLYDGGIRVARVKEAESRAAVAAEGFKKTQELAVREIVVAAD
TLRSALESNQAALNLVKTSFITYDAALESYRNGVGTITVANETANGLLNAQQMSADAHAA
SLVAAANLAFVMGKMTNTSESLALLH
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgcacgttgtattgacggcccggatagtcaaaataagtttgactggctcggta
ttgagtctgagcatgttgatcgccggttgtgctacagatcgcttggatcttgcacctgca
tcttataccgaaccttggtcgcctgatgccaatgcttcggtggggagcggtaacttttct
gtcccaccgaatccgttggtggcggaattggccccgccgccgaccataaaaagtgaccgc
gcttattcgttaccagaattgattgatatcgcccaaagtcagaatccggatactcgaatt
gcctggcaacaagcgcggcaagcagcactggcagtaggaatgggggaggcgatattttta
cctatcatttcagcgagtgtgattggcggctaccagagtaccaccacgccgttaccttac
gcgattggcggcgataaggatctaaaaacctccggcagtgcagtggttcctgctttggca
ttacagtggcttatctttgattttggtcagcgcagcgcgctgcttgacgccgctaaacag
acttcctatgccgcgaatgtgaccttcaatggtatgcaccaaaagctcatttatgatgtc
acccgcagttacttccaatatggcgtggcacaaactcagcgccagatagcagagcaaaca
ctgaagaatagcttaaaaattcaagatgctgccgaggaacgccgtaagaatggggtcgcg
acgacagttgaagtggcgctggcgcagcagcaggttgcacagtctgaattacgtcgcgtg
atggcaaagggcactgaacgtgatgcttatcaggcattgctgggcgcgatgggcgtttct
ccgtcattggatatcaaagtcgggtatgccgaggatcgtgctttgccaaaggggatcagc
gcacctaccgaaaaaatgattcggctggcgctttcccagcggccggatgtgttagccagt
tatgcggcggttgaagccgccaaagcgggtatcaaagcaacggaagctgatttcttgccg
aaagtctatctggccggggctgtggcggggggggatgggcgttttgatattcagggcttg
cccggcatcagccaacaaacctcatcttccagtattttggtcggcgtcagtgtccctctt
tatgatggcggaattcgcgtggcgcgggtgaaagaggcagaatcccgagccgcagttgct
gccgaaggatttaagaaaacgcaggagttggcagtgcgtgaaatcgtggtggcggcagat
acattgcgctctgcgcttgaatccaatcaggcggcactcaatttggtgaaaacctccttt
attacctatgacgccgcactggaatcttatcgcaatggtgtcggcaccataacagtggct
aatgagactgccaatgggttgttgaatgcgcagcaaatgagcgctgacgcgcatgccgct
tctttggtcgctgccgctaatctggcttttgtgatgggcaaaatgacgaatacttcagaa
tcattggcactgctgcattag
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