Yersinia pseudotuberculosis PB1/+ (serotype 1B): YPTS_0424
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Entry
YPTS_0424 CDS
T00744
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K22015
formate dehydrogenase (hydrogenase) / hydrogen-dependent carbon dioxide reductase [EC:
1.17.98.4
1.17.98.5
]
Organism
ypb
Yersinia pseudotuberculosis PB1/+ (serotype 1B)
Pathway
ypb00680
Methane metabolism
ypb00720
Other carbon fixation pathways
ypb01100
Metabolic pathways
ypb01120
Microbial metabolism in diverse environments
ypb01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ypb00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
YPTS_0424
00680 Methane metabolism
YPTS_0424
Enzymes [BR:
ypb01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.4 formate dehydrogenase (hydrogenase)
YPTS_0424
1.17.98.5 hydrogen-dependent carbon dioxide reductase
YPTS_0424
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
NADHdh-2_N
Motif
Other DBs
NCBI-ProteinID:
ACC87412
LinkDB
All DBs
Position
468543..470690
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AA seq
715 aa
AA seq
DB search
MKKILTVCPYCGSGCKLNLLVEDGEIVGAEPADGVTNQGALCLKGYYGWDFLNDTRLLTP
RLTTPLLRRQRGEAFQPVSWEAAIAFITAKLSAIKERHGPDAIMMTGSSRGPGNEANYVM
QKFARAAIGTNNIDCCARLCHGPSVAGLQQTLGNGAMSNSIGEIENTDCILVFGYNAADS
HPIVARRILKAKNKGAKLIVCDPRHIETARIADQWLPLKNGANMALVNAFIHVLIEEKLY
DANYVRDHTRGFDELKAGVAAYRPEDVEPITGLSAKAVRQAMRTYAAAPAATLLWGMGVT
QWGQAVDVVKGLSSLALLTGNLGRPNVGVGPVRGQNNVQGACDMGVLPNTFPGYEKVTDS
EARARFAHAWGVAELPAHVGYSITDVPHKVAEGKLKAYYVFGEDPIQTEPDLAAMRAAFA
ALDLVVVQDIFMTKTAELADVVLPATSWGEHEGVYTSADRGFQHFNKAIEPKGDVKPDWE
IISLISTAMGYPMAYQNTQQIWDEMRGLCPPFAGATYDKLAGLGYVQWPCPTEDHPGTPY
LYTDNQFATADGKGLLSCAPWQPPHEQTDSDYPLALCTVREVGHYSCRSMTGNCATLKIL
ADEPGYVQIHPEDASYLGVIDQALIWISSRRGRVIARASVTERANRGAVYMTYQWWIGAC
NELTVDHVDPVSKTPEFKHCAVKVEAISDQTAAEQYVEQQYSQLKKRLSDAAVVP
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatcctcacggtctgcccctattgcggctcgggatgtaagttaaatttattg
gtcgaagacggcgagattgtcggtgccgaacccgctgatggtgtcactaatcagggagcg
ttgtgtctgaaagggtactacggctgggattttcttaacgatacccgcttgttgacgcca
cggttgaccacgcccttattgcggcgtcagcgaggcgaggcgtttcagcccgtgagttgg
gaggcggcgattgcgtttatcacggctaaacttagcgccataaaagaacgtcatgggcct
gatgccatcatgatgacgggctcttcccgtgggccaggtaacgaagccaattatgtgatg
caaaaatttgctcgtgcggcgatcggtaccaacaatattgattgctgcgcccgcctgtgc
catggcccgtcagtggctggattgcagcaaacgctgggtaacggcgcgatgagcaactct
atcggtgaaattgagaatactgactgcattttggtctttggttataacgcggcggattct
caccccattgttgccagacgtattctgaaagccaaaaataagggggctaaacttattgtc
tgtgatccacggcatatcgaaaccgcccgtatcgccgatcaatggttgccgctgaaaaat
ggtgccaacatggcgctggtcaatgcatttattcatgttctgattgaagaaaaactctac
gacgcaaattatgtccgcgaccatacccgtggctttgatgaactgaaagcaggcgttgcc
gcataccgcccagaggatgttgaaccgattacggggctgtctgccaaagcggtgcgtcag
gccatgcgcacttatgctgcggcccctgcggccacccttctatgggggatgggcgtgacc
caatggggccaggcggttgatgtggtgaaagggctctcttcgttagcgttattaaccggt
aatctggggcgaccaaatgtgggcgtcgggccagtacgaggtcagaataatgtacagggc
gcgtgtgatatgggcgtgttgccgaataccttccccggctatgaaaaagtgaccgacagt
gaggccagagcgcgttttgctcacgcctggggggtcgctgaactgcccgcgcatgttggg
tattcgattaccgatgtgccgcataaagtggcagaagggaagcttaaggcctactacgta
tttggtgaagatccaatccagaccgagccagatttagcggcgatgcgtgcggcttttgcc
gcactggatctggtcgtggtgcaggatatctttatgaccaaaacggcagaactggcggat
gtcgtactgcctgcaacatcctggggggagcatgaaggggtctataccagtgctgaccgg
gggttccagcactttaataaagccattgaaccgaaaggggatgtgaaaccggactgggag
attatcagcctgatatcaaccgccatgggttacccgatggcataccaaaatacgcaacaa
atctgggatgagatgcgtggcctgtgcccgccattcgctggggccacctatgataaactg
gcaggattgggctacgtgcaatggccttgcccaaccgaagatcaccctggaacaccttat
ctctataccgataaccaattcgcgacggctgacggcaaaggtttgctcagttgcgcgccg
tggcagccgcctcatgagcagaccgacagtgattatcctctggccctctgtaccgtgcgt
gaagtggggcattacagttgccgctcaatgaccggtaactgcgccacgctaaaaatcttg
gcggatgagccgggctatgtgcaaatccatcctgaggatgccagctatttgggggttatc
gatcaggcgctgatctggatttcatcacgacgcgggagagtgatcgctcgtgccagcgtg
accgaacgggctaatcgtggcgcggtgtatatgacctatcagtggtggattggggcctgt
aatgaactgactgtggaccatgttgatcccgtgtcaaaaacaccggaatttaaacattgt
gcggttaaggtcgaggcgattagcgatcaaactgcggcagagcaatatgttgagcaacaa
tacagccagttgaaaaaacggttatcagacgccgcagttgtaccatga
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