Yersinia pestis Harbin 35 (biovar Medievalis): YPC_3820
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Entry
YPC_3820 CDS
T01874
Symbol
ibeB
Name
(GenBank) putative outer membrane efflux lipoprotein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph01501
beta-Lactam resistance
yph02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YPC_3820 (ibeB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
YPC_3820 (ibeB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yph02000
]
YPC_3820 (ibeB)
01504 Antimicrobial resistance genes [BR:
yph01504
]
YPC_3820 (ibeB)
Transporters [BR:
yph02000
]
Other transporters
Pores ion channels [TC:
1
]
YPC_3820 (ibeB)
Antimicrobial resistance genes [BR:
yph01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
YPC_3820 (ibeB)
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
YPC_3820 (ibeB)
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
YPC_3820 (ibeB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Rubis-subs-bind
RCF1-5-like_lid
Motif
Other DBs
NCBI-ProteinID:
ADW00258
LinkDB
All DBs
Position
complement(3677182..3678588)
Genome browser
AA seq
468 aa
AA seq
DB search
MFSRILILSLPALLAGCISLDPDYQRPVAPVPATLPYSTASSSKAADIPWQETIIDPKLR
QVIALALESNRDLRQAIADIEAARAQYGVQRAAQIPTVNAGVNGSRGRGLSDTSDGNNNT
AISQSYGAQASVSAFELDLFGKKSSLSHAEFETYLATEEAAKTTRITLIADTATAWVTLA
ADQNQLLLAEETLKSAEQSLKLAQLRQKNGIASRIDVAAMETLYQSARADVAQYKTTVAQ
DKNALDLLVGQPVAAHLLPVTASTLPEVIKAVPVGLSSDVLLNRPDVLEAEHKLKSANAN
IGAARAAFFPSVTLTASGGVSSSALSTLLSEGAGIWSLAPAITLPIFDGGANRAALEYSQ
AQKTGYIAAYEKAIQTAFKEVADALARKATIQEQRAAQQAYVAAAQESVELAQKRYKQGI
DTYLNMLDAQRTLYAAQTRLIAVQQIQTNNLITLYKVLGGGVSDVAKE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtcgtatactgatattatcgttacccgcgctgctggccggatgtatttctctc
gatccggactatcagcgcccagtggcaccggttccggcaaccttgccttactcaaccgcc
agtagcagcaaggcggcagatattccgtggcaggagacgatcattgatcctaaactgcgc
caggtgattgcgttggcattagagagcaaccgtgacctacgccaagctattgccgatatc
gaagcggcccgtgcgcaatatggtgtgcaacgggccgcccagataccaacggttaatgca
ggagtcaatggcagccgtgggcgcggattgtccgatacctctgatggcaacaacaatacc
gctatcagccagagttatggtgcccaagccagtgttagtgcctttgaactggatttattt
ggtaaaaaaagcagcttgtctcatgctgaatttgaaacctatctggcaacagaagaagcg
gcgaaaaccacccgcatcacactgattgctgatactgcgacagcttgggtaacactggcg
gctgaccagaatcaattattgctggccgaagagacgttaaaaagtgcggagcaatcttta
aaattggcacaactgcggcagaaaaatgggatagcgtcacgtattgatgtagcggcgatg
gaaacgttgtatcaatcagcgcgggccgatgttgcacaatacaaaaccacggtagcgcag
gataaaaatgcactggatttgttggtgggccaacccgtggcagcacatttactgccagtg
acggcctctacattgccggaggtcatcaaagctgtacccgttgggctttcctctgatgtg
ttgttgaaccggcctgatgtattggaagccgagcataaactgaaatcggccaatgccaat
attggggccgctcgggcggcattcttccccagtgtgaccttaaccgccagtgggggcgtc
agcagttcggcactttcaacattgcttagtgagggggcagggatttggtcattagccccg
gcgattaccttgccgatatttgatggcggggcaaatcgggctgcactggaatattcacag
gcacagaaaaccggctacattgccgcatatgagaaagcgattcagacggcgtttaaggaa
gtcgccgatgcactggcgcgtaaagcgaccattcaagaacaacgggcagcacagcaagct
tacgtggcggcggcacaagaaagtgttgaactggcacaaaaacgctataaacagggaatc
gatacatacttgaatatgttagatgctcaacgcaccttatatgccgcgcaaactcgtctg
attgccgtgcaacagatacaaactaacaatttgattacgttgtataaagttttaggtggt
ggggtatctgacgtcgccaaagagtag
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