Yersinia pestis El Dorado: CH46_1609
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Entry
CH46_1609 CDS
T03719
Name
(GenBank) efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
ypl
Yersinia pestis El Dorado
Pathway
ypl01501
beta-Lactam resistance
ypl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ypl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH46_1609
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CH46_1609
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ypl02000
]
CH46_1609
01504 Antimicrobial resistance genes [BR:
ypl01504
]
CH46_1609
Transporters [BR:
ypl02000
]
Other transporters
Pores ion channels [TC:
1
]
CH46_1609
Antimicrobial resistance genes [BR:
ypl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CH46_1609
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
CH46_1609
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
CH46_1609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Rubis-subs-bind
RCF1-5-like_lid
Motif
Other DBs
NCBI-ProteinID:
AJJ15645
UniProt:
A0AAX2HY16
LinkDB
All DBs
Position
1774348..1775754
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AA seq
468 aa
AA seq
DB search
MFSRILILSLPALLAGCISLDPDYQRPVAPVPATLPYSTASSSKAADIPWQETIIDPKLR
QVIALALESNRDLRQAIADIEAARAQYGVQRAAQIPTVNAGVNGSRGRGLSDTSDGNNNT
AISQSYGAQASVSAFELDLFGKKSSLSHAEFETYLATEEAAKTTRITLIADTATAWVTLA
ADQNQLLLAEETLKSAEQSLKLAQLRQKNGIASRIDVAAMETLYQSARADVAQYKTTVAQ
DKNALDLLVGQPVAAHLLPVTASTLPEVIKAVPVGLSSDVLLNRPDVLEAEHKLKSANAN
IGAARAAFFPSVTLTASGGVSSSALSTLLSEGAGIWSLAPAITLPIFDGGANRAALEYSQ
AQKTGYIAAYEKAIQTAFKEVADALARKATIQEQRAAQQAYVAAAQESVELAQKRYKQGI
DTYLNMLDAQRTLYAAQTRLIAVQQIQTNNLITLYKVLGGGVSDVAKE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtcgtatactgatattatcgttacccgcgctgctggccggatgtatttctctc
gatccggactatcagcgcccagtggcaccggttccggcaaccttgccttactcaaccgcc
agtagcagcaaggcggcagatattccgtggcaggagacgatcattgatcctaaactgcgc
caggtgattgcgttggcattagagagcaaccgtgacctacgccaagctattgccgatatc
gaagcggcccgtgcgcaatatggtgtgcaacgggccgcccagataccaacggttaatgca
ggagtcaatggcagccgtgggcgcggattgtccgatacctctgatggcaacaacaatacc
gctatcagccagagttatggtgcccaagccagtgttagtgcctttgaactggatttattt
ggtaaaaaaagcagcttgtctcatgctgaatttgaaacctatctggcaacagaagaagcg
gcgaaaaccacccgcatcacactgattgctgatactgcgacagcttgggtaacactggcg
gctgaccagaatcaattattgctggccgaagagacgttaaaaagtgcggagcaatcttta
aaattggcacaactgcggcagaaaaatgggatagcgtcacgtattgatgtagcggcgatg
gaaacgttgtatcaatcagcgcgggccgatgttgcacaatacaaaaccacggtagcgcag
gataaaaatgcactggatttgttggtgggccaacccgtggcagcacatttactgccagtg
acggcctctacattgccggaggtcatcaaagctgtacccgttgggctttcctctgatgtg
ttgttgaaccggcctgatgtattggaagccgagcataaactgaaatcggccaatgccaat
attggggccgctcgggcggcattcttccccagtgtgaccttaaccgccagtgggggcgtc
agcagttcggcactttcaacattgcttagtgagggggcagggatttggtcattagccccg
gcgattaccttgccgatatttgatggcggggcaaatcgggctgcactggaatattcacag
gcacagaaaaccggctacattgccgcatatgagaaagcgattcagacggcgtttaaggaa
gtcgccgatgcactggcgcgtaaagcgaccattcaagaacaacgggcagcacagcaagct
tacgtggcggcggcacaagaaagtgttgaactggcacaaaaacgctataaacagggaatc
gatacatacttgaatatgttagatgctcaacgcaccttatatgccgcgcaaactcgtctg
attgccgtgcaacagatacaaactaacaatttgattacgttgtataaagttttaggtggt
ggggtatctgacgtcgccaaagagtag
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