Yersinia pestis 91001 (biovar Microtus): YP_2978
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Entry
YP_2978 CDS
T00165
Symbol
hasF
Name
(GenBank) ABC-transporter outer membrane component
KO
K12340
outer membrane protein
Organism
ypm
Yersinia pestis 91001 (biovar Microtus)
Pathway
ypm01501
beta-Lactam resistance
ypm01503
Cationic antimicrobial peptide (CAMP) resistance
ypm02020
Two-component system
ypm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ypm00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
YP_2978 (hasF)
09132 Signal transduction
02020 Two-component system
YP_2978 (hasF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
YP_2978 (hasF)
01503 Cationic antimicrobial peptide (CAMP) resistance
YP_2978 (hasF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ypm02000
]
YP_2978 (hasF)
02044 Secretion system [BR:
ypm02044
]
YP_2978 (hasF)
01504 Antimicrobial resistance genes [BR:
ypm01504
]
YP_2978 (hasF)
Transporters [BR:
ypm02000
]
Other transporters
Pores ion channels [TC:
1
]
YP_2978 (hasF)
Secretion system [BR:
ypm02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
YP_2978 (hasF)
RTX toxin transporter
YP_2978 (hasF)
Multiple protein transporter
YP_2978 (hasF)
RaxAB-RaxC type I secretion system protein
YP_2978 (hasF)
Antimicrobial resistance genes [BR:
ypm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
YP_2978 (hasF)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
YP_2978 (hasF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Ribosomal_S5_C
LRR_NXF1-5
Dak2
Motif
Other DBs
NCBI-ProteinID:
AAS63157
UniProt:
A0A0H2W6T6
LinkDB
All DBs
Position
complement(3314502..3315905)
Genome browser
AA seq
467 aa
AA seq
DB search
MQMKKLLPLLIGLSLAGFSTMSQAENLLQVYKQARDSNPDLRKAAADRDAAYEKINEVRS
PLLPQLGLSAGYTHANGFRDASNSPDSNATSGSLKLTQTIFDMSKWRALTLQEKAAGIQD
VTFQTSEQQLILNTATAYFNVLRAIDSLSYTEAQKQSVYRQLDQTTQRFNVGLVAITDVQ
NARASYDTVLAAEVAARNNLDNALESLRQITGVYYPELASLNVERLKTQRPDAVNNLLKE
AEKRNLSLLSARLSQDLAREQIKSAETGYMPTVDLTASSSITNTRYSGGTPSSQQVNNDS
GQNQIGVQFSLPLYSGGATNSAVKQAQYNFVGASELLESAHRNMVQTLRSSFNNISASIS
SINAYQQVVISNQSSLDAMEAGYQVGTRTILDVLTATTNLYQSKQQLADARYNYLINQLN
IKSALGTLNMNDLMALNAVLDKPVPTSAAALAPENTTRQTVTTPRAQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaatgaagaaactgctcccccttcttatcgggctgagtctggctggtttcagcacc
atgagccaggcagagaacttgctgcaagtttataagcaagccagggatagtaacccggat
ttacgtaaagccgctgctgatcgcgatgccgcatatgaaaaaatcaatgaagtacgcagt
ccactgttgccacaacttggtttaagtgccggctatacacatgctaatggatttcgtgac
gcgtctaacagcccagatagcaatgccacatcaggctctctaaaactgacccagacaatt
tttgacatgtctaaatggcgcgccctgaccttacaggaaaaagcggctgggattcaggat
gtgacattccagaccagcgaacagcaactgattcttaacactgcaacggcttatttcaac
gtactcagagcgattgacagcctctcttatactgaagcgcagaaacaatcggtctatcgt
cagttggatcaaacaactcaacgttttaatgtgggtttagtggccattactgatgtgcag
aacgcccgagccagctacgataccgtgttagcggcagaagtggccgcccgtaataatctg
gataacgcactagagagcttgcgccagattactggtgtttattatcccgaattggcgtcg
ttgaatgtagaacgattgaagactcaacgcccagatgcggttaataacctattgaaagaa
gctgaaaaacgtaacctttctttgctttctgcccgtttgagccaagacttggcacgtgag
caaattaagtctgcggaaacgggctatatgccaaccgtcgatttgaccgcctcatcttcg
ataaccaatacccgttacagtggcggaacccccagttctcaacaggtaaataatgattcc
ggccagaaccaaattggcgtgcaatttagcttaccgctgtacagcggtggtgccaccaat
tctgcggtgaaacaagcgcagtataatttcgttggtgccagtgagttgttggaaagtgca
catcgcaatatggtgcaaacgcttcgctcatcatttaataatatttcagcctcgatcagc
agcatcaatgcttaccagcaagtggttatttctaaccaaagctctttggatgcaatggaa
gctggctatcaggtaggcacccgtaccattctggatgttttgactgcaacgactaacctg
tatcagtccaaacaacaattggctgatgctcgttataactatttaatcaatcagttaaat
atcaagtcggcactggggacgttgaatatgaacgacctgatggcactaaacgccgtattg
gataaaccggtcccgacgtcagcggctgctctggcaccagagaatactactcgccaaact
gtcactacaccacgcgctcagtaa
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