Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_3629
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Entry
YPDSF_3629 CDS
T00505
Name
(GenBank) formate dehydrogenase alpha subunit
KO
K22015
formate dehydrogenase (hydrogenase) / hydrogen-dependent carbon dioxide reductase [EC:
1.17.98.4
1.17.98.5
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp00680
Methane metabolism
ypp00720
Other carbon fixation pathways
ypp01100
Metabolic pathways
ypp01120
Microbial metabolism in diverse environments
ypp01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
YPDSF_3629
00680 Methane metabolism
YPDSF_3629
Enzymes [BR:
ypp01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.4 formate dehydrogenase (hydrogenase)
YPDSF_3629
1.17.98.5 hydrogen-dependent carbon dioxide reductase
YPDSF_3629
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
NADHdh-2_N
Motif
Other DBs
NCBI-ProteinID:
ABP41979
LinkDB
All DBs
Position
complement(4169353..4171500)
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AA seq
715 aa
AA seq
DB search
MKKILTVCPYCGSGCKLNLLVEDGEIVGAEPADGVTNQGALCLKGYYGWDFLNDTRLLTP
RLTTPLLRRQRGEAFQPVSWEAAIAFITAKLSAIKERHGPDAIMMTGSSRGPGNEANYVM
QKFARAAIGTNNIDCCARLCHGPSVAGLQQTLGNGAMSNSIGEIENTDCILVFGYNAADS
HPIVARRILKAKNKGAKLIVCDPRHIETARIADQWLPLKNGANMALVNAFIHVLIEEKLY
DANYVRDHTRGFDELKAGVAAYRPEDVEPITGLSAKAVRQAMRTYAAAPAATLLWGMGVT
QWGQAVDVVKGLSSLALLTGNLGRPNVGVGPVRGQNNVQGACDMGVLPNTFPGYEKVTDS
EARARFAHAWGVAELPAHVGYSITDVPHKVAEGKLKAYYVFGEDPIQTEPDLAAMRAAFA
ALDLVVVQDIFMTKTAELADVVLPATSWGEHEGVYTSADRGFQHFNKAIEPKGDVKPDWE
IISLISTAMGYPMAYQNTQQIWDEMRGLCPPFAGVTYEKLAGLGYVQWPCPTEDHPGTPY
LYTDNQFATADGKGLLSCAPWQPPHEQTDSDYPLALCTVREVGHYSCRSMTGNCGTLKIL
ADEPGYVQIHPEDASYLGVIDQALIWISSRRGKVIARASVTERANRGAVYMTYQWWIGAC
NELTVDHVDPVSKTPEFKHCAVKVEAISDQTAAEQYVEQQYSQLKKRLSDAAVVP
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatcctcacggtctgcccctattgcggctcgggatgtaagttaaatttattg
gtcgaagacggcgagattgtcggtgccgaacccgctgatggtgtcactaatcagggagcg
ttgtgtctgaaagggtactacggctgggattttcttaacgatacccgcttgttgacgcca
cggttgaccacgcccttattgcggcgtcagcgaggcgaggcgtttcagcccgtgagttgg
gaggcggcgattgcgtttatcacggctaaacttagcgccataaaagaacgtcatgggcct
gatgccatcatgatgacgggctcttcccgtgggccaggtaacgaagccaattatgtgatg
caaaaatttgctcgtgcggcgatcggtaccaacaatattgattgctgcgcccgcctgtgc
catggcccgtcagtggctggattgcagcaaacgctgggtaacggcgcgatgagcaactct
atcggtgaaattgagaatactgactgcattttggtctttggttataacgcggcggattct
caccccattgttgccagacgtattctgaaagccaaaaataagggggctaaacttattgtc
tgtgatccacggcatatcgaaaccgcccgtatcgccgatcaatggttgccgctgaaaaat
ggtgccaacatggcactggtcaatgcatttattcatgttctgattgaagaaaaactctac
gacgcaaattatgtccgcgaccatacccgtggctttgatgaactgaaagcaggcgttgcc
gcataccgcccagaggatgttgaaccgattacggggctgtctgccaaagcggtgcgtcag
gccatgcgcacttatgctgcggcccctgcggccacccttctatgggggatgggcgtgacc
caatggggccaggcggttgatgtggtgaaagggctctcttcgttagcgttattaaccggt
aatctggggcgaccaaatgtgggcgtcgggccagtacgaggtcagaataatgtacagggc
gcgtgtgatatgggcgtgttgccgaataccttccccggctatgaaaaagtgaccgacagt
gaggccagagcgcgttttgctcacgcctggggggtcgctgaactgcccgcgcatgttggg
tattcgattactgatgtgccgcataaagtggcagaagggaagcttaaggcctactacgta
tttggtgaagatccaatccagaccgagccagatttagcggcgatgcgtgcggcttttgcc
gcactggatctggtcgtggtgcaggatatctttatgaccaaaacggcagaactggcggat
gtcgtactgcctgcaacatcctggggggagcatgaaggggtctataccagtgctgaccgg
gggttccagcactttaataaagccattgaaccgaaaggggatgtgaaaccggactgggag
attatcagcctgatatcaaccgccatgggttacccgatggcataccaaaatacgcagcaa
atctgggatgagatgcgtggcctgtgcccgccattcgctggggtcacctatgagaaactg
gcaggattgggctacgtgcaatggccttgcccaaccgaagatcaccctggaacaccttat
ctctataccgataaccaattcgcgacggctgacggcaaaggtttgctcagttgcgcgccg
tggcagccgcctcatgagcagaccgacagtgattatcctctggccctctgtaccgtgcgt
gaagtggggcattacagttgccgctcaatgaccggtaactgcggcacgctaaaaatcttg
gcggatgagccgggctatgtgcaaatccatcctgaggatgccagctatttgggggttatc
gatcaggcgctgatctggatttcatcacgacgcgggaaagtgatcgcccgtgccagtgtg
accgaacgggctaatcgtggtgcggtgtatatgacctatcagtggtggattggggcctgt
aatgaactgactgtggaccatgttgatcccgtgtcaaaaacaccggaatttaaacattgt
gcggttaaggtcgaggcgattagcgatcaaactgcggcagagcaatatgttgagcaacaa
tacagccagttgaaaaaacggttatcagacgccgcagttgtaccatga
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