Yersinia pseudotuberculosis ATCC 6904: DJ40_1895
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Entry
DJ40_1895 CDS
T03307
Name
(GenBank) efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Pathway
ypq01501
beta-Lactam resistance
ypq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DJ40_1895
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DJ40_1895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ypq02000
]
DJ40_1895
01504 Antimicrobial resistance genes [BR:
ypq01504
]
DJ40_1895
Transporters [BR:
ypq02000
]
Other transporters
Pores ion channels [TC:
1
]
DJ40_1895
Antimicrobial resistance genes [BR:
ypq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DJ40_1895
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DJ40_1895
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DJ40_1895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Rubis-subs-bind
RCF1-5-like_lid
Motif
Other DBs
NCBI-ProteinID:
AIN15329
LinkDB
All DBs
Position
complement(2094441..2095847)
Genome browser
AA seq
468 aa
AA seq
DB search
MFSRILILSLPALLAGCISLDPDYQRPVAPVPATLPYSTASSSKAADIPWQETIIDPKLR
QVIALALESNRDLRQAIADIEAARAQYGVQRAAQLPTVNAGVNGSRGRGLSDTSDGNNNT
AISQSYGAQASVSAFELDLFGKKSSLSHAEFETYLATEEAAKTTRITLIADTATAWVTLA
ADQNQLLLAEETLKSAEQSLKLAQLRQKNGIASRIDVAAMETLYQSARADVAQYKTTVAQ
DKNALDLLVGQPVAAHLLPVAASTLPEVIKAVPVGLSSDVLLNRPDVLEAEHKLKSANAN
IGAARAAFFPSVTLTASGGVSSSALSTLLSEGAGIWSLAPAITLPIFDGGANRAALEYSQ
AQKTGYIAAYEKAIQTAFKEVADALARKATIQEQRAAQQAYVAAAQESVELAQKRYKQGI
DTYLNMLDAQRTLYAAQTRLIAVQQIQTNNLITLYKVLGGGVSDVAKE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtcgtatactgatattatcgttacccgcgctgctggccggatgtatttctctc
gatccggactatcagcgcccagtggcaccggttccggcaaccttgccttactcaaccgcc
agtagcagcaaggcggcagatattccgtggcaggagacgatcattgatcctaaactgcgc
caggtgattgcgttggcattagagagcaaccgtgacctacgccaagctattgccgatatc
gaagcggcccgtgcgcaatatggtgtgcaacgggccgcccagctaccaacggttaatgca
ggagtcaatggcagccgtgggcgcggattgtccgatacctctgatggcaacaacaatacc
gctatcagccagagttatggtgcccaagccagtgttagtgcctttgaactggatttattt
ggtaaaaaaagcagcttgtctcatgctgaatttgaaacctatctggcaacagaagaagcg
gcgaaaaccacccgcatcacactgattgctgatactgcgacagcttgggtaacactggcg
gctgaccagaatcaattattgctggccgaagagacgttaaaaagtgcggagcaatcttta
aaattggcacaactgcggcagaaaaatgggatagcgtcacgtattgatgtagcggcgatg
gaaacgttgtatcaatcagcgcgggccgatgttgcacaatacaaaaccacggtagcgcag
gataaaaatgcactagatttgttggtgggccaacccgtggcagcacatttactgccagtg
gcggcctctacattgccggaggtcatcaaagctgtacccgttgggctttcctctgatgtg
ttgttgaaccggcctgatgtattggaagccgagcataaactgaaatcggccaatgccaat
attggggccgctcgggcggcattcttccccagtgtgaccttaaccgccagtgggggcgtc
agcagttcggcactttcaacattgcttagtgagggggcagggatttggtcattagccccg
gcgattaccttgccgatatttgatggcggggcaaatcgggctgcactggaatattcacag
gcacagaaaaccggctacattgccgcatatgagaaagcgattcagacggcgtttaaggaa
gtcgccgatgcactggcgcgtaaagcgaccattcaagaacaacgggcagcacagcaagct
tacgtggcggcggcacaagaaagtgttgaactggcacaaaaacgctataaacagggaatc
gatacatacttgaatatgttagatgctcaacgcaccttatatgccgcgcaaactcgtctg
attgccgtgcaacagatacaaactaacaatttgattacgttgtataaagttttaggtggt
ggggtatctgacgtcgccaaagagtag
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