Yersinia rohdei: CH64_2042
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Entry
CH64_2042 CDS
T03610
Name
(GenBank) type I secretion outer membrane, TolC family protein
KO
K12340
outer membrane protein
Organism
yro
Yersinia rohdei
Pathway
yro01501
beta-Lactam resistance
yro01503
Cationic antimicrobial peptide (CAMP) resistance
yro02020
Two-component system
yro03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CH64_2042
09132 Signal transduction
02020 Two-component system
CH64_2042
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CH64_2042
01503 Cationic antimicrobial peptide (CAMP) resistance
CH64_2042
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yro02000
]
CH64_2042
02044 Secretion system [BR:
yro02044
]
CH64_2042
01504 Antimicrobial resistance genes [BR:
yro01504
]
CH64_2042
Transporters [BR:
yro02000
]
Other transporters
Pores ion channels [TC:
1
]
CH64_2042
Secretion system [BR:
yro02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
CH64_2042
RTX toxin transporter
CH64_2042
Multiple protein transporter
CH64_2042
RaxAB-RaxC type I secretion system protein
CH64_2042
Antimicrobial resistance genes [BR:
yro01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
CH64_2042
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
CH64_2042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Ribosomal_S5_C
Motif
Other DBs
NCBI-ProteinID:
AJJ11400
UniProt:
A0A0U1HP15
LinkDB
All DBs
Position
2263010..2264491
Genome browser
AA seq
493 aa
AA seq
DB search
MKKLLPLLIGLSLAGFSTMSQAENLLQVYKQARDSNPDLRKSAADRDAAYEKINEARSPL
LPQLGLGAGYTHTNGFRDASDNPDSNATSGSLQLTQTIFDMSKWRALTLQEKAAGIQDVT
FQTSEQALILNTATAYFAVLNAIDTLSYTEAQKQSVYRQLDQTTQRFNVGLVAITDVQNA
RASYDTVLADEVTARNNLDNALENLRQITGVYYPELASLNVDRLKTERPQAVNNLLKDAE
KRNLSLLSARLSQDLAREQIKSAETGYMPTIDLTASSSVTNTRYSGGTPSTQQVNNDAGQ
NRIGVQLSLPLYSGGATNSTVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNISASISSI
KAYEQVVISNQSSLDAMEAGYQVGTRTILDVLTATTNLYQSKQQLANARYNYLINQLNIK
SALGTLNMNDLMELNGVLDKPVPTSATALAPDNATQNAYADGDNAQSAPRVTPVSQPTTA
APAAARNGNPFRN
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaactgctcccccttcttatcgggctgagtctggctggtttcagtaccatgagc
caggcagagaacttgctgcaagtttataaacaagccagggatagtaacccggatttgcgc
aaatccgcggctgatcgcgatgctgcatatgaaaaaattaatgaagctcgcagcccactg
ctaccacagcttggtttaggtgcgggttacacccataccaatggtttccgtgatgcttct
gacaacccggatagcaatgcgacgtcaggttcattacaactgacccaaaccattttcgat
atgtcgaaatggcgcgcactgactttacaagaaaaagccgctggtattcaggatgttacg
ttccaaactagcgagcaagcgctgatcctgaacactgcaactgcttattttgccgtactg
aacgccattgatacgctgtcttatacagaagcgcagaagcaatctgtctatcgccagtta
gaccaaacaactcaacgttttaatgtgggtttagtggcgattactgacgtgcagaacgcc
cgtgccagctacgataccgtgttagcggatgaagttacggcccgcaacaacctggataac
gcgctggaaaatctgcgtcaaattaccggtgtttattacccagagctggcgtcactgaat
gttgaccgcttaaaaaccgaacgcccgcaagccgttaataacctgttgaaagatgctgaa
aaacgtaacctttctttgctttctgcccgtttgagccaagatttggcacgtgagcaaatt
aaatcagcagaaacgggttatatgccaaccatcgatttgactgcatcatcttcagtcact
aatactcgttacagtggtggcaccccaagcactcagcaagtcaacaatgatgcaggtcag
aacagaattggcgtgcaactgagcttaccgctatacagcggtggcgcgacgaattctacg
gtgaaacaagcccagtataacttcgtcggagccagcgagcagttggaaagcgctcatcgc
agtgtggtgcagacggtacgttcctcattcaataatatctcagcctcaatcagcagtatt
aaggcttatgagcaggtggttatttccaaccaaagctcattggatgcaatggaagccggt
tatcaggtcggtactcgtaccattctggatgtgttgactgcgacaaccaacttgtatcag
tccaaacaacaactcgccaacgcgcgttataactatctgattaatcagttaaatataaaa
tccgctttgggtacgttgaacatgaacgacctgatggaactgaatggcgtattggataaa
ccagtaccaacctcagcgacagctctggcaccggataatgccacccaaaatgcctacgct
gatggcgataacgctcagtcggcaccacgtgtcaccccggttagccaaccgacgacagcg
gctccagccgctgcacgtaatggtaatccattccgcaactaa
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